RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 C1RLQ9NZP8 487 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 ZNF736B4DX44 427 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 IGKV1D-33P01593 117 aa13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 IGKV1-33P01594 117 aa13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 PMP2P02689 132 aa13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 HLA-DMAP28067 261 aa13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 RFX2P48378 723 aa13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 DGCR2P98153 550 aa13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 DYRK1AQ13627 763 aa13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 HES1Q14469 280 aa13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 C16orf82Q7Z2V1 217 aa13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 OR6Q1Q8NGQ2 317 aa13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 SMIM4Q8WVI0 70 aa13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 GIMAP1Q8WWP7 306 aa13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 RBM14Q96PK6 669 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 COL6A5A8TX70 2615 aa13.69□□□□□ -0.22
RABGGTA-203ENST00000543002 TMEM89A2RUT3 159 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 J3QRK9 145 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 OR2F2O95006 317 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 NDUFA7O95182 113 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 CT45A6P0DMU7 189 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 CT45A5P0DMU8 189 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 CT45A7P0DMV0 189 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 AADACP22760 399 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 HRH1P35367 487 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 RELBQ01201 579 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 SSBP1Q04837 148 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 DHRS11Q6UWP2 260 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 FAM131AQ6UXB0 335 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 CCDC190Q86UF4 302 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 OR2T10Q8NGZ9 312 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 TAF15Q92804 592 aaKnown RBP eCLIP13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 EAF1Q96JC9 268 aaPredicted RBP13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 AKR1E2Q96JD6 320 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 SLC25A33Q9BSK2 321 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 SDHAF2Q9NX18 166 aa13.68□□□□□ -0.22
RABGGTA-203ENST00000543002 IGKV1D-13A0A0B4J2D9 117 aa13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 M0R1X1 148 aa13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 GSTZ1O43708 216 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 SLC22A5O76082 557 aa13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 PPYP01298 95 aa13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 IGKV1-13P0DP09 117 aa13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 TMEM11P17152 192 aa13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 HNF4GQ14541 408 aa13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 ACTBL2Q562R1 376 aa13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 ZNF660Q6AZW8 331 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 ZNF645Q8N7E2 425 aa13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 C5orf30Q96GV9 206 aa13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 NPFFR1Q9GZQ6 430 aa13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 ZNF107Q9UII5 783 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 V9GYH0 126 aa13.67□□□□□ -0.22
RABGGTA-203ENST00000543002 OR5H14A6NHG9 310 aa13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 TSPAN9O75954 239 aa13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 MOSP00540 346 aa13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 TBPP20226 339 aa13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 PTBP1P26599 531 aaKnown RBP eCLIP13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 ETV6P41212 452 aa13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 RAG2P55895 527 aa13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 FOXL1Q12952 345 aa13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 VAX1Q5SQQ9 334 aa13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 Q6ZSV7 163 aa13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 Q8N6K4 173 aa13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 TMEM229BQ8NBD8 167 aa13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 OR5AN1Q8NGI8 311 aa13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 OR4F5Q8NH21 305 aa13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 RANBP3Q9H6Z4 567 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 RBMX2Q9Y388 322 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-203ENST00000543002 H0YJW9 148 aa13.65□□□□□ -0.22
RABGGTA-203ENST00000543002 MC5RP33032 325 aa13.65□□□□□ -0.22
RABGGTA-203ENST00000543002 CNPY1Q3B7I2 92 aa13.65□□□□□ -0.22
RABGGTA-203ENST00000543002 SPANXN2Q5MJ10 180 aa13.65□□□□□ -0.22
RABGGTA-203ENST00000543002 GLDNQ6ZMI3 551 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-203ENST00000543002 ZNF383Q8NA42 475 aa13.65□□□□□ -0.22
RABGGTA-203ENST00000543002 DRAXINQ8NBI3 349 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-203ENST00000543002 OR4C13Q8NGP0 309 aa13.65□□□□□ -0.22
RABGGTA-203ENST00000543002 OR6F1Q8NGZ6 308 aa13.65□□□□□ -0.22
RABGGTA-203ENST00000543002 ZNF2Q9BSG1 426 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-203ENST00000543002 C16orf95Q9H693 158 aa13.65□□□□□ -0.22
RABGGTA-203ENST00000543002 MOB4Q9Y3A3 225 aa13.65□□□□□ -0.22
RABGGTA-203ENST00000543002 M0QYG6 137 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 M0QZK8 103 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 IGLV2-14P01704 120 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 CD74P04233 296 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 CD3DP04234 171 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 THBS3P49746 956 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 COMPP49747 757 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 LINC00205P59089 165 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 TAS2R19P59542 299 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 HERV-K104P61576 105 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 MSMO1Q15800 293 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 ZNF79Q15937 498 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 RNASE10Q5GAN6 216 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 OR8H1Q8NGG4 311 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 SECTM1Q8WVN6 248 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 MOB3AQ96BX8 217 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 RBMXL1Q96E39 390 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 ADTRPQ96IZ2 230 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 SLC5A7Q9GZV3 580 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 TAS2R8Q9NYW2 309 aa13.64□□□□□ -0.23
RABGGTA-203ENST00000543002 WASHC3Q9Y3C0 194 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms