RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ZNF556Q9HAH1 456 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 SHPKQ9UHJ6 478 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 RAB22AQ9UL26 194 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 BAIAP2Q9UQB8 552 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 VSIG4Q9Y279 399 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 SIGLEC9Q9Y336 463 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 RBM7Q9Y580 266 aaKnown RBP4.35□□□□□ -1.71
DDB1-219ENST00000541513 IGHV5-51A0A0C4DH38 117 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 A0A0G2JMP0 313 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 K7ERU9 68 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 COPEO14579 308 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 MRASO14807 208 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 STK16O75716 305 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 AIFM1O95831 613 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 IFNA17P01571 189 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 GIPP09681 153 aaPredicted RBP4.34□□□□□ -1.71
DDB1-219ENST00000541513 SLC35G6P0C7Q6 338 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 PSG1P11464 419 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 MYL12AP19105 171 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 TAC1P20366 129 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 CMPK1P30085 196 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 TSPOP30536 169 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 PYCR1P32322 319 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 APOC4P55056 127 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 TCTAP57738 103 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 CKS1BP61024 79 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 TBPL1P62380 186 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 EMX1Q04741 257 aaPredicted RBP4.34□□□□□ -1.71
DDB1-219ENST00000541513 PRDX1Q06830 199 aaKnown RBP4.34□□□□□ -1.71
DDB1-219ENST00000541513 HNRNPA0Q13151 305 aaKnown RBP4.34□□□□□ -1.71
DDB1-219ENST00000541513 C16orf72Q14CZ0 275 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 SURF2Q15527 256 aaPredicted RBP4.34□□□□□ -1.71
DDB1-219ENST00000541513 PRSS8Q16651 343 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 C17orf58Q2M2W7 97 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 CEACAM16Q2WEN9 425 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 PABPC1L2AQ5JQF8 200 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 ATAD3CQ5T2N8 411 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 HAGHLQ6PII5 290 aaPredicted RBP4.34□□□□□ -1.71
DDB1-219ENST00000541513 Q6ZVH6 145 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 SLC16A13Q7RTY0 426 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 HOGA1Q86XE5 327 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 OR4M2Q8NGB6 313 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 OR4P4Q8NGL7 312 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 SSC4DQ8WTU2 575 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 CNRIP1Q96F85 164 aaPredicted RBP4.34□□□□□ -1.71
DDB1-219ENST00000541513 OR2M2Q96R28 347 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 HIST1H4GQ99525 98 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 P2RX4Q99571 388 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 PECRQ9BY49 303 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 METTL17Q9H7H0 456 aaPredicted RBP4.34□□□□□ -1.71
DDB1-219ENST00000541513 VSIRQ9H7M9 311 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 SH2D2AQ9NP31 389 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 ZNF71Q9NQZ8 489 aaPredicted RBP4.34□□□□□ -1.71
DDB1-219ENST00000541513 TMEM216Q9P0N5 145 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 COPZ2Q9P299 210 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 DHCR7Q9UBM7 475 aaKnown RBP4.34□□□□□ -1.71
DDB1-219ENST00000541513 TAC3Q9UHF0 121 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 VAX2Q9UIW0 290 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 ANXA10Q9UJ72 324 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 JPT1Q9UK76 154 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 C14orf166Q9Y224 244 aaKnown RBP4.34□□□□□ -1.71
DDB1-219ENST00000541513 ST3GAL6Q9Y274 331 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 TRAPPC4Q9Y296 219 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 NEUROG3Q9Y4Z2 214 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 V9GY05 133 aa4.34□□□□□ -1.71
DDB1-219ENST00000541513 CNTRLQ7Z7A1 2325 aa4.34□□□□□ -1.72
DDB1-219ENST00000541513 CACNA1GO43497 2377 aa4.34□□□□□ -1.72
DDB1-219ENST00000541513 DSPP15924 2871 aaKnown RBP4.33□□□□□ -1.72
DDB1-219ENST00000541513 IGHV4-4A0A075B6R2 117 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 IGKV1-8A0A0C4DH67 115 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 A0A1W2PNU3 283 aaPredicted RBP4.33□□□□□ -1.72
DDB1-219ENST00000541513 FOXI3A8MTJ6 420 aaPredicted RBP4.33□□□□□ -1.72
DDB1-219ENST00000541513 MPTX1A8MV57 137 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 GGT1P19440 569 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 MYCNOSP40205 109 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 RND2P52198 227 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 SLC18A1P54219 525 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 RRAS2P62070 204 aaPredicted RBP4.33□□□□□ -1.72
DDB1-219ENST00000541513 ARG2P78540 354 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 PLP2Q04941 152 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 ZNF239Q16600 458 aaKnown RBP4.33□□□□□ -1.72
DDB1-219ENST00000541513 TMEM128Q5BJH2 165 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 UNQ9370/PRO34162Q6UXP9 181 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 Q6ZPA2 131 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 FOXL2NBQ6ZUU3 175 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 TRPT1Q86TN4 253 aaKnown RBP4.33□□□□□ -1.72
DDB1-219ENST00000541513 CBR4Q8N4T8 237 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 ZNF676Q8N7Q3 588 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 ST6GALNAC3Q8NDV1 305 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 OR2Z1Q8NG97 314 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 OR6N1Q8NGY5 312 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 OR13G1Q8NGZ3 307 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 TAF15Q92804 592 aaKnown RBP eCLIP4.33□□□□□ -1.72
DDB1-219ENST00000541513 NARS2Q96I59 477 aaKnown RBP4.33□□□□□ -1.72
DDB1-219ENST00000541513 OR4K3Q96R72 315 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 SULT4A1Q9BR01 284 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 CHST5Q9GZS9 411 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 LRTM1Q9HBL6 345 aa4.33□□□□□ -1.72
DDB1-219ENST00000541513 KCNJ16Q9NPI9 418 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms