RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 LFNGQ8NES3 379 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 OR10G2Q8NGC3 310 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 OR5D18Q8NGL1 313 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 DYNLRB2Q8TF09 96 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 C2CD4CQ8TF44 421 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 FGGYQ96C11 551 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 NSMCE2Q96MF7 247 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 RDH12Q96NR8 316 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 NR1H4Q96RI1 486 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-214ENST00000540865 FEVQ99581 238 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 NIPSNAP1Q9BPW8 284 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 TEX12Q9BXU0 123 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 FBXL15Q9H469 300 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 SEPSECSQ9HD40 501 aaKnown RBP3.41□□□□□ -1.86
SNHG1-214ENST00000540865 CLN6Q9NWW5 311 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 NDE1Q9NXR1 346 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 TECRQ9NZ01 308 aaKnown RBP3.41□□□□□ -1.86
SNHG1-214ENST00000540865 GNG12Q9UBI6 72 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 RNF213Q63HN8 5207 aa3.4□□□□□ -1.86
SNHG1-214ENST00000540865 A0A0B4J203 849 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 KIR2DL5BA0A0G2JN68 375 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 KIR2DL5BA0A0G2JPC4 375 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 METTL15A6NJ78 407 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 FCN1O00602 326 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 PRYO14603 147 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 ARPC2O15144 300 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 SPINT2O43291 252 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 SULT1C4O75897 302 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 MT-ND4P03905 459 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 HSD17B1P14061 328 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 PLGLAQ15195 96 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 RBMS2Q15434 407 aaKnown RBP3.4□□□□□ -1.87
SNHG1-214ENST00000540865 ANKRD55Q3KP44 614 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 TMEM244Q5VVB8 128 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 OR2T5Q6IEZ7 315 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 TMEM179BQ7Z7N9 219 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 KIR2DL5AQ8N109 375 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 PRSS35Q8N3Z0 413 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 MAPKAPK5-AS1Q8N8E1 139 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 SUMF2Q8NBJ7 301 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 PXT1Q8NFP0 134 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 OR2T29Q8NH02 315 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 KIR2DL5BQ8NHK3 375 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 OSR1Q8TAX0 266 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-214ENST00000540865 UBALD1Q8TB05 177 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 SNAPC3Q92966 411 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 USMG5Q96IX5 58 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 ATP6V1G3Q96LB4 118 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 RNF5Q99942 180 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 FAM103A1Q9BTL3 118 aaKnown RBP3.4□□□□□ -1.87
SNHG1-214ENST00000540865 MRPL20Q9BYC9 149 aaKnown RBP3.4□□□□□ -1.87
SNHG1-214ENST00000540865 REEP1Q9H902 201 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 ADGRL4Q9HBW9 690 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 ZNF355PQ9NSJ1 428 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 RCC2Q9P258 522 aaKnown RBP3.4□□□□□ -1.87
SNHG1-214ENST00000540865 APLNQ9ULZ1 77 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 GAB2Q9UQC2 676 aa3.4□□□□□ -1.87
SNHG1-214ENST00000540865 SAMHD1Q9Y3Z3 626 aaKnown RBP3.4□□□□□ -1.87
SNHG1-214ENST00000540865 C2orf70A6NJV1 201 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 SLC22A1O15245 554 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 RBBP9O75884 186 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 FADS2O95864 444 aaKnown RBP3.39□□□□□ -1.87
SNHG1-214ENST00000540865 TRBV12-3P01733 135 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 HBZP02008 142 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 ISG15P05161 165 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 FOLR2P14207 255 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 NANOS2P60321 138 aaKnown RBP3.39□□□□□ -1.87
SNHG1-214ENST00000540865 KISS1Q15726 138 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 DEFB135Q30KP9 77 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 PIGYQ3MUY2 71 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 NHLRC3Q5JS37 347 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 C6orf183Q5T699 404 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 ZNF691Q5VV52 312 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 CGB2Q6NT52 195 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 FAM71F2Q6NXP2 309 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 ZNF497Q6ZNH5 498 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 ZNF833PQ6ZTB9 187 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 SSX6Q7RTT6 188 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 ODF3L1Q8IXM7 274 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 TCEANCQ8N8B7 351 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 OR5T1Q8NG75 326 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 OR52L2PQ8NGH6 319 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 OR10V1Q8NGI7 309 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 OR52B4Q8NGK2 314 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 OR13C9Q8NGT0 318 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 C11orf45Q8TAV5 145 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 GIPC3Q8TF64 312 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 CCDC107Q8WV48 283 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 GLMPQ8WWB7 406 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 GHSRQ92847 366 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 CMTM5Q96DZ9 223 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 TMEM68Q96MH6 324 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 ABHD14AQ9BUJ0 271 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 TM2D2Q9BX73 214 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 MAGIXQ9H6Y5 334 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 ARL8BQ9NVJ2 186 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 TVP23BQ9NYZ1 205 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 FBXL17Q9UF56 701 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 ENOPH1Q9UHY7 261 aa3.39□□□□□ -1.87
SNHG1-214ENST00000540865 A0A1W2PQL4 384 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms