RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TRGC2P03986 189 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 SLC38A11Q08AI6 406 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 ZNF146Q15072 292 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 RPP25LQ8N5L8 163 aaKnown RBP11.79□□□□□ -0.52
UBE3B-210ENST00000539599 NECAP1Q8NC96 275 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 TCTEX1D2Q8WW35 142 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 TVP23CQ96ET8 276 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 IFT22Q9H7X7 185 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 LIN7CQ9NUP9 197 aaKnown RBP11.79□□□□□ -0.52
UBE3B-210ENST00000539599 POLDIP2Q9Y2S7 368 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 SPAARA0A1B0GVQ0 90 aa11.78□□□□□ -0.52
UBE3B-210ENST00000539599 PRSS44E7EML9 344 aa11.78□□□□□ -0.52
UBE3B-210ENST00000539599 HSPB1P04792 205 aaKnown RBP11.78□□□□□ -0.52
UBE3B-210ENST00000539599 VKORC1L1Q8N0U8 176 aa11.78□□□□□ -0.52
UBE3B-210ENST00000539599 POM121Q96HA1 1249 aa11.78□□□□□ -0.52
UBE3B-210ENST00000539599 ZFHX2Q9C0A1 2572 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-210ENST00000539599 IGHV3OR15-7A0A075B7D8 119 aa11.78□□□□□ -0.52
UBE3B-210ENST00000539599 AP4M1O00189 453 aa11.78□□□□□ -0.52
UBE3B-210ENST00000539599 PPIHO43447 177 aaKnown RBP11.78□□□□□ -0.52
UBE3B-210ENST00000539599 BCL2P10415 239 aa11.78□□□□□ -0.52
UBE3B-210ENST00000539599 MDH2P40926 338 aaKnown RBP11.78□□□□□ -0.52
UBE3B-210ENST00000539599 COL10A1Q03692 680 aa11.78□□□□□ -0.52
UBE3B-210ENST00000539599 MSMPQ1L6U9 139 aa11.78□□□□□ -0.52
UBE3B-210ENST00000539599 Q3ZCU0 254 aa11.78□□□□□ -0.52
UBE3B-210ENST00000539599 LRP11Q86VZ4 500 aa11.78□□□□□ -0.52
UBE3B-210ENST00000539599 GMPPAQ96IJ6 420 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-210ENST00000539599 WDR61Q9GZS3 305 aaKnown RBP11.78□□□□□ -0.52
UBE3B-210ENST00000539599 OPN3Q9H1Y3 402 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-210ENST00000539599 GSN-AS1Q9NRJ2 163 aa11.78□□□□□ -0.52
UBE3B-210ENST00000539599 TIMM8AO60220 97 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-210ENST00000539599 TNFRSF9Q07011 255 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 LRRC75BQ2VPJ9 315 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 FAM201AQ5SY85 155 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 WDR25Q64LD2 544 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-210ENST00000539599 WDR31Q8NA23 367 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 LEAP2Q969E1 77 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 LSM10Q969L4 123 aaKnown RBP11.77□□□□□ -0.53
UBE3B-210ENST00000539599 METTL1Q9UBP6 276 aaKnown RBP11.77□□□□□ -0.53
UBE3B-210ENST00000539599 PSG11Q9UQ72 335 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 WIPI2Q9Y4P8 454 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 MAP1LC3B2A6NCE7 125 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 CECR9P0C854 216 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 EGR1P18146 543 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 KIR2DL2P43627 348 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-210ENST00000539599 GCSAMLQ5JQS6 135 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 WDR82Q6UXN9 313 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 FAM214BQ7L5A3 538 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 CA5BP1Q8WTZ4 195 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 TAF15Q92804 592 aaKnown RBP eCLIP11.77□□□□□ -0.53
UBE3B-210ENST00000539599 GALMQ96C23 342 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 MAP1LC3BQ9GZQ8 125 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 SEBOXQ9HB31 216 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-210ENST00000539599 TREM2Q9NZC2 230 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 DOK5Q9P104 306 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 CLCF1Q9UBD9 225 aa11.77□□□□□ -0.53
UBE3B-210ENST00000539599 PCNX1Q96RV3 2341 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 IQCF6A8MYZ5 107 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 SOX15O60248 233 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 FABP1P07148 127 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 RTP5Q14D33 572 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 RPUSD4Q96CM3 377 aaKnown RBP11.76□□□□□ -0.53
UBE3B-210ENST00000539599 AURKAIP1Q9NWT8 199 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-210ENST00000539599 MIOXQ9UGB7 285 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 ARFGEF3Q5TH69 2177 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 NPIPB11E5RHQ5 1161 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 SELLP14151 372 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 RAC2P15153 192 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 MRPL49Q13405 166 aaKnown RBP11.76□□□□□ -0.53
UBE3B-210ENST00000539599 FIP1L1Q6UN15 594 aaKnown RBP11.76□□□□□ -0.53
UBE3B-210ENST00000539599 RPRMLQ8N4K4 120 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 ZNF645Q8N7E2 425 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 OR5T1Q8NG75 326 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 KCNIP1Q9NZI2 227 aa11.76□□□□□ -0.53
UBE3B-210ENST00000539599 TACC2O95359 2948 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 TMEM30CPA0ZSE6 113 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 BTBD17A6NE02 478 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 S100A9P06702 114 aaKnown RBP11.75□□□□□ -0.53
UBE3B-210ENST00000539599 TRIP6Q15654 476 aaKnown RBP11.75□□□□□ -0.53
UBE3B-210ENST00000539599 KHDC3LQ587J8 217 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 VHLLQ6RSH7 139 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 CD177Q8N6Q3 437 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 TMEM178AQ8NBL3 297 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 DEFB124Q8NES8 71 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 DUSP13Q9UII6 198 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 ANKRD11Q6UB99 2663 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-210ENST00000539599 HCFC1P51610 2035 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 SVEP1Q4LDE5 3571 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 HIST1H2BKO60814 126 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 IFNA17P01571 189 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 HIST1H2BJP06899 126 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 HIST1H2BOP23527 126 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 HIST1H2BBP33778 126 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 HIST1H2BDP58876 126 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 B2MP61769 119 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 HIST1H2BCP62807 126 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 CTAG1AP78358 180 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 TGFBR3Q03167 851 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 HIST2H2BEQ16778 126 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-210ENST00000539599 ACP7Q6ZNF0 438 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms