RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 PLEKHF2Q9H8W4 249 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 CLDN1O95832 211 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 HSD17B11Q8NBQ5 300 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 OR1S2Q8NGQ3 325 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 SDSLQ96GA7 329 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 ZNF665Q9H7R5 613 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 TMEM106BQ9NUM4 274 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 AUP1Q9Y679 476 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 KIAA1324LA8MWY0 1029 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-205ENST00000538545 TMEM178BH3BS89 294 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 C1QL1O75973 258 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 GNLYP22749 145 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 PLA2G5P39877 138 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 HNF4GQ14541 408 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 PPP1R35Q8TAP8 253 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 AKR1E2Q96JD6 320 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 BARX1Q9HBU1 254 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-205ENST00000538545 CTSZQ9UBR2 303 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 RNF115Q9Y4L5 304 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 TET2Q6N021 2002 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-205ENST00000538545 GZMHP20718 246 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 COL8A2P25067 703 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 APOBEC3AP31941 199 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-205ENST00000538545 FHITP49789 147 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 ARHGDIBP52566 201 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 PAX9P55771 341 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 EWSR1Q01844 656 aaKnown RBP eCLIP11.67□□□□□ -0.541e-13■■■■■ 50.4
ACTN1-205ENST00000538545 ID3Q02535 119 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 TMEM267Q0VDI3 215 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-205ENST00000538545 EIF4EBP1Q13541 118 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-205ENST00000538545 MUC15Q8N387 334 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 OR2C3Q8N628 320 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 Q8TCH9 128 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 H1FXQ92522 213 aaKnown RBP11.67□□□□□ -0.54
ACTN1-205ENST00000538545 C14orf79Q96F83 325 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 LINC00052Q96N35 136 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 C11orf1Q9H5F2 150 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 KCNJ16Q9NPI9 418 aa11.67□□□□□ -0.54
ACTN1-205ENST00000538545 LIN7CQ9NUP9 197 aaKnown RBP11.67□□□□□ -0.54
ACTN1-205ENST00000538545 CGB3P0DN86 165 aa11.66□□□□□ -0.54
ACTN1-205ENST00000538545 CGB7P0DN87 165 aa11.66□□□□□ -0.54
ACTN1-205ENST00000538545 GPR12P47775 334 aa11.66□□□□□ -0.54
ACTN1-205ENST00000538545 SLC25A10Q9UBX3 287 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-205ENST00000538545 CENPEQ02224 2701 aa11.66□□□□□ -0.54
ACTN1-205ENST00000538545 PPIAL4EA0A075B759 164 aa11.66□□□□□ -0.54
ACTN1-205ENST00000538545 A0A1W2PPR1 153 aa11.66□□□□□ -0.54
ACTN1-205ENST00000538545 PPIAL4DF5H284 164 aa11.66□□□□□ -0.54
ACTN1-205ENST00000538545 M0R1X1 148 aa11.66□□□□□ -0.54
ACTN1-205ENST00000538545 F12P00748 615 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-205ENST00000538545 PPIAL4FP0DN26 164 aa11.66□□□□□ -0.54
ACTN1-205ENST00000538545 CT45A1Q5HYN5 189 aa11.66□□□□□ -0.54
ACTN1-205ENST00000538545 CT45A3Q8NHU0 189 aa11.66□□□□□ -0.54
ACTN1-205ENST00000538545 STOML3Q8TAV4 291 aa11.66□□□□□ -0.54
ACTN1-205ENST00000538545 PPIAL4AQ9Y536 164 aa11.66□□□□□ -0.54
ACTN1-205ENST00000538545 FCGR3BO75015 233 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 SNAPC5O75971 98 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 TEX36Q5VZQ5 186 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 TMEM252Q8N6L7 170 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 IFI27L2Q9H2X8 130 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 A0A1B0GV50 99 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 MFSD2BA6NFX1 497 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 LRRC30A6NM36 301 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 PITX3O75364 302 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 FAM157CP0CG43 387 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 HTD2P86397 168 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 TFF3Q07654 80 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 AVPI1Q5T686 147 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 STPG2Q8N412 459 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 SPIN2AQ99865 258 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 SPIN2BQ9BPZ2 258 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 EGLN1Q9GZT9 426 aa11.65□□□□□ -0.54
ACTN1-205ENST00000538545 TRGV10A0A0A0MS01 117 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 KBTBD11-OT1A0A1B0GTJ5 212 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 AGPAT2O15120 278 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 TXNL1O43396 289 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 GPR137BO60478 399 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 CD55P08174 381 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 MUC1P15941 1255 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-205ENST00000538545 VAMP2P63027 116 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 SRSF3P84103 164 aaKnown RBP11.64□□□□□ -0.55
ACTN1-205ENST00000538545 ZDHHC16Q969W1 377 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 PLEKHA2Q9HB19 425 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 OR6C3Q9NZP0 311 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 CLN8Q9UBY8 286 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 CELSR2Q9HCU4 2923 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 ZNF705EA8MWA4 302 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-205ENST00000538545 ADH4P08319 380 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 P2RY1P47900 373 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 RUNX1Q01196 453 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 LYG1Q8N1E2 194 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 OR5C1Q8NGR4 320 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 SLC25A32Q9H2D1 315 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 TMEM231Q9H6L2 316 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 PFDN2Q9UHV9 154 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 IGHV1-69-2A0A0G2JMI3 117 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 CLEC18AA5D8T8 446 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 DUTP33316 252 aaKnown RBP11.64□□□□□ -0.55
ACTN1-205ENST00000538545 DYNLT3P51808 116 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 OR2B8PP59922 312 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 RPL31P62899 125 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms