RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 ABHD12Q8N2K0 398 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 STPG2Q8N412 459 aa14.49□□□□□ -0.09
SCARB1-205ENST00000538291 NUP214P35658 2090 aaPredicted RBP14.48□□□□□ -0.09
SCARB1-205ENST00000538291 WISP3O95389 354 aaPredicted RBP14.48□□□□□ -0.09
SCARB1-205ENST00000538291 LIMS1P48059 325 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 H1FOOQ8IZA3 346 aaPredicted RBP14.48□□□□□ -0.09
SCARB1-205ENST00000538291 MUC15Q8N387 334 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 OR1N2Q8NGR9 330 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 ZNF430Q9H8G1 570 aaPredicted RBP14.48□□□□□ -0.09
SCARB1-205ENST00000538291 TMEM74BQ9NUR3 256 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 TNFSF18Q9UNG2 199 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 SCN3AQ9NY46 2000 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 ASXL3Q9C0F0 2248 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 UBR3Q6ZT12 1888 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 LIPFP07098 398 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 OR4B1Q8NGF8 309 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 RAB24Q969Q5 203 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 PRO1933Q9H354 126 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 RP1P56715 2156 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 C7orf77A4D0Y5 90 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 DNM1P46Q6ZS02 220 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 ST6GAL2Q96JF0 529 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 ATP5G2Q06055 141 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 TMEM30BQ3MIR4 351 aa14.48□□□□□ -0.09
SCARB1-205ENST00000538291 IGLV1-36A0A0B4J1U3 117 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 LOC101059948A0A1B0GTJ6 334 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 STAG3L2P0CL84 134 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 ISOC2Q96AB3 205 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 DLL3Q9NYJ7 618 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 CEBPDP49716 269 aaPredicted RBP14.47□□□□□ -0.09
SCARB1-205ENST00000538291 MEOX2P50222 304 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 RND2P52198 227 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 TMEM222Q9H0R3 208 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 CENPVQ7Z7K6 275 aaPredicted RBP14.47□□□□□ -0.09
SCARB1-205ENST00000538291 CLEC7AQ9BXN2 247 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 AURKAIP1Q9NWT8 199 aaPredicted RBP14.47□□□□□ -0.09
SCARB1-205ENST00000538291 HSPB7Q9UBY9 170 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 PCM1Q15154 2024 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 OR2A4O95047 310 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 PF4P02776 101 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 OR11H7Q8NGC8 314 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 OR2A7Q96R45 310 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 FOXJ2Q9P0K8 574 aa14.47□□□□□ -0.09
SCARB1-205ENST00000538291 IGF2P01344 180 aa14.46□□□□□ -0.09
SCARB1-205ENST00000538291 SNRPCP09234 159 aaKnown RBP14.46□□□□□ -0.09
SCARB1-205ENST00000538291 MFAP2P55001 183 aa14.46□□□□□ -0.09
SCARB1-205ENST00000538291 S1PR2O95136 353 aa14.46□□□□□ -0.09
SCARB1-205ENST00000538291 ISG15P05161 165 aa14.46□□□□□ -0.09
SCARB1-205ENST00000538291 ZNF345Q14585 488 aa14.46□□□□□ -0.09
SCARB1-205ENST00000538291 RFLNBQ8N5W9 214 aa14.46□□□□□ -0.09
SCARB1-205ENST00000538291 JPT1Q9UK76 154 aa14.46□□□□□ -0.09
SCARB1-205ENST00000538291 SIRT4Q9Y6E7 314 aaPredicted RBP14.46□□□□□ -0.09
SCARB1-205ENST00000538291 PLA2G10O15496 165 aa14.46□□□□□ -0.09
SCARB1-205ENST00000538291 ZNF324O75467 553 aaPredicted RBP14.46□□□□□ -0.09
SCARB1-205ENST00000538291 SAXO1Q8IYX7 474 aa14.46□□□□□ -0.09
SCARB1-205ENST00000538291 TLNRD1Q9H1K6 362 aa14.46□□□□□ -0.09
SCARB1-205ENST00000538291 MCM3APO60318 1980 aa14.46□□□□□ -0.09
SCARB1-205ENST00000538291 SEC16AO15027 2179 aa14.46□□□□□ -0.09
SCARB1-205ENST00000538291 IGKV3D-15A0A087WSY6 115 aa14.46□□□□□ -0.1
SCARB1-205ENST00000538291 TRBV5-5A0A0J9YX44 114 aa14.46□□□□□ -0.1
SCARB1-205ENST00000538291 A0A1W2PP11 408 aa14.46□□□□□ -0.1
SCARB1-205ENST00000538291 GREM1O60565 184 aa14.46□□□□□ -0.1
SCARB1-205ENST00000538291 IGKV3-15P01624 115 aa14.46□□□□□ -0.1
SCARB1-205ENST00000538291 DCAF12L2Q5VW00 463 aa14.46□□□□□ -0.1
SCARB1-205ENST00000538291 PET117Q6UWS5 81 aa14.46□□□□□ -0.1
SCARB1-205ENST00000538291 TMEM186Q96B77 213 aa14.46□□□□□ -0.1
SCARB1-205ENST00000538291 A0A1W2PR77 199 aa14.46□□□□□ -0.1
SCARB1-205ENST00000538291 ZNF729A6NN14 1252 aaPredicted RBP14.46□□□□□ -0.1
SCARB1-205ENST00000538291 CFDP00746 253 aaPredicted RBP14.46□□□□□ -0.1
SCARB1-205ENST00000538291 FCGR2BP31994 310 aaPredicted RBP14.46□□□□□ -0.1
SCARB1-205ENST00000538291 SMIM12Q96EX1 92 aa14.46□□□□□ -0.1
SCARB1-205ENST00000538291 SRXN1Q9BYN0 137 aa14.46□□□□□ -0.1
SCARB1-205ENST00000538291 RALYQ9UKM9 306 aaKnown RBP14.46□□□□□ -0.1
SCARB1-205ENST00000538291 CBY1Q9Y3M2 126 aa14.46□□□□□ -0.1
SCARB1-205ENST00000538291 CGB1A6NKQ9 187 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 LHFPL6Q9Y693 200 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 LNP1A1A4G5 178 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 BCL2P10415 239 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 PTGDSP41222 190 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 FAM53AQ6NSI3 398 aaPredicted RBP14.45□□□□□ -0.1
SCARB1-205ENST00000538291 SPSB2Q99619 263 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 HSPE1P61604 102 aaKnown RBP14.45□□□□□ -0.1
SCARB1-205ENST00000538291 TMEM252Q8N6L7 170 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 PACRGQ96M98 296 aaPredicted RBP14.45□□□□□ -0.1
SCARB1-205ENST00000538291 AMELYQ99218 206 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 RGPD4Q7Z3J3 1758 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 PLAUP00749 431 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 TSPOP30536 169 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 SNAI3Q3KNW1 292 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 FDCSPQ8NFU4 85 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 LINC01560Q8TB33 94 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 DUX5Q96PT3 197 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 TXNDC17Q9BRA2 123 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 RBKSQ9H477 322 aa14.45□□□□□ -0.1
SCARB1-205ENST00000538291 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.44□□□□□ -0.1
SCARB1-205ENST00000538291 LOC389332A0A1B0GUA5 103 aa14.44□□□□□ -0.1
SCARB1-205ENST00000538291 ZNF502Q8TBZ5 544 aa14.44□□□□□ -0.1
SCARB1-205ENST00000538291 CDC42EP3Q9UKI2 254 aa14.44□□□□□ -0.1
SCARB1-205ENST00000538291 SVILO95425 2214 aa14.44□□□□□ -0.1
SCARB1-205ENST00000538291 A6NDN8 102 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms