RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SOSTQ9BQB4 213 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 MOB4Q9Y3A3 225 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 IGKV1D-8A0A087WSZ0 117 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 IGHV1-3A0A0C4DH29 117 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 ADARB2-AS1A8MUL3 147 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 GABARAPH6UMI1 98 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 M0QZK8 103 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 CTDSPLO15194 276 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 FCER2P06734 321 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 CTXN2P0C2S0 81 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 ETV6P41212 452 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 REG1BP48304 166 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 ZNF134P52741 427 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 ARPC4P59998 168 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 MORN2Q502X0 79 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 RNASE12Q5GAN4 147 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 SLC25A48Q6ZT89 311 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 OR10J5Q8NHC4 309 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 CABLES2Q9BTV7 478 aa14.2□□□□□ -0.14
TNFRSF1A-209ENST00000536717 IGKV1-6A0A0C4DH72 117 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 BET1O15155 118 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 YPEL1O60688 119 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 RBBP9O75884 186 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 IGKV1D-33P01593 117 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 IGKV1-33P01594 117 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 GAPDHP04406 335 aaKnown RBP14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 PTBP1P26599 531 aaKnown RBP eCLIP14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 RCVRNP35243 200 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 PPP1CCP36873 323 aaKnown RBP14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 ACTBP60709 375 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 HES1Q14469 280 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 GNMTQ14749 295 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 NSUN5P1Q3KNT7 163 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 IGSF11Q5DX21 431 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 LINC00299Q6ZSB3 139 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 OR52I2Q8NH67 350 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 YPEL2Q96QA6 119 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 GINS4Q9BRT9 223 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 ANAPC10Q9UM13 185 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 V9GYH0 126 aa14.19□□□□□ -0.14
TNFRSF1A-209ENST00000536717 IGHV3-72A0A0B4J1Y9 119 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 TMEM11P17152 192 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 CEACAM6P40199 344 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 ZNF137PP52743 207 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 DGCR2P98153 550 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 EBI3Q14213 229 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 HNF4GQ14541 408 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 PYDC2Q56P42 97 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 CT45A1Q5HYN5 189 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 LY6G6FQ5SQ64 297 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 MOB3BQ86TA1 216 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 NDUFA11Q86Y39 141 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 OR5AU1Q8NGC0 362 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 CT45A3Q8NHU0 189 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 SMIM4Q8WVI0 70 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 RTN4IP1Q8WWV3 396 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 SNAPC3Q92966 411 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 OR1A1Q9P1Q5 309 aa14.18□□□□□ -0.14
TNFRSF1A-209ENST00000536717 TRBV6-7A0A0A0MS04 114 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 OPN1MWP04001 364 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 OPN1MW2P0DN77 364 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 OPN1MW3P0DN78 364 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 NAT1P18440 290 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 TAS2R46P59540 309 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 CD83Q01151 205 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 SSBP1Q04837 148 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 TCTEX1D4Q5JR98 221 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 C9orf152Q5JTZ5 239 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 C10orf99Q6UWK7 81 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 C5orf56Q8N8D9 126 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 OR2AK2Q8NG84 335 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 OR5AP2Q8NGF4 316 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 EDARADDQ8WWZ3 215 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 NECAP2Q9NVZ3 263 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 KLK11Q9UBX7 282 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 MTFP1Q9UDX5 166 aa14.17□□□□□ -0.14
TNFRSF1A-209ENST00000536717 FGF16O43320 207 aa14.16□□□□□ -0.14
TNFRSF1A-209ENST00000536717 IL3RAP26951 378 aa14.16□□□□□ -0.14
TNFRSF1A-209ENST00000536717 OR3A3P47888 321 aa14.16□□□□□ -0.14
TNFRSF1A-209ENST00000536717 CENPVQ7Z7K6 275 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF1A-209ENST00000536717 EAF1Q96JC9 268 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF1A-209ENST00000536717 ABHD14AQ9BUJ0 271 aa14.16□□□□□ -0.14
TNFRSF1A-209ENST00000536717 RDH8Q9NYR8 311 aa14.16□□□□□ -0.14
TNFRSF1A-209ENST00000536717 GSTZ1O43708 216 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 HLA-DMAP28067 261 aa14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 ZNF45Q02386 682 aa14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 CDK10Q15131 360 aa14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 ZNF79Q15937 498 aa14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 Q8N6K4 173 aa14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 OR5H2Q8NGV7 314 aa14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 RBMXL1Q96E39 390 aaKnown RBP14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 ZNF736B4DX44 427 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 ITGB1BP1O14713 200 aa14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 C1QL4Q86Z23 238 aa14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 Q8N402 240 aa14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 TOLLIPQ9H0E2 274 aa14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 TAS2R8Q9NYW2 309 aa14.15□□□□□ -0.14
TNFRSF1A-209ENST00000536717 DNAH3Q8TD57 4116 aa14.14□□□□□ -0.15
TNFRSF1A-209ENST00000536717 OR5H8P0DN80 308 aa14.14□□□□□ -0.15
TNFRSF1A-209ENST00000536717 CD1BP29016 333 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms