RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 RPS18P62269 152 aaKnown RBP6.62□□□□□ -1.35
CPSF7-216ENST00000536548 RPL23P62829 140 aaKnown RBP6.62□□□□□ -1.35
CPSF7-216ENST00000536548 MEF2BQ02080 365 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-216ENST00000536548 PAX5Q02548 391 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 ZNF92Q03936 586 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 C1orf194Q5T5A4 169 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 FAM69BQ5VUD6 431 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 C16orf47Q6ZP98 133 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-216ENST00000536548 ZNF818PQ6ZRF7 136 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 ZNF525Q8N782 197 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 NAXEQ8NCW5 288 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 OR51G1Q8NGK1 321 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 THAP3Q8WTV1 239 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-216ENST00000536548 DYRK2Q92630 601 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 GPR146Q96CH1 333 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 ZNF501Q96CX3 271 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-216ENST00000536548 SPACA9Q96E40 222 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-216ENST00000536548 TMUB1Q9BVT8 246 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 PLK3Q9H4B4 646 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 CHODLQ9H9P2 273 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 FGF21Q9NSA1 209 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 RYDENQ9NUL5 291 aaKnown RBP6.62□□□□□ -1.35
CPSF7-216ENST00000536548 FKBP11Q9NYL4 201 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 PSENENQ9NZ42 101 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 OR6C3Q9NZP0 311 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 TAAR3PQ9P1P4 343 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 JMJD1CQ15652 2540 aa6.62□□□□□ -1.35
CPSF7-216ENST00000536548 TRBV6-6A0A0A6YYG2 114 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 KIR2DL5BA0A0G2JN68 375 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 KIR2DL5BA0A0G2JPC4 375 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 CTXND1A0A1B0GTU2 59 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 hCG_38984A0A1B0GV85 526 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 TMEM210A6NLX4 147 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 KIAA1324LA8MWY0 1029 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-216ENST00000536548 B4E171 279 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 EREGO14944 169 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 TOX3O15405 576 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-216ENST00000536548 SOX15O60248 233 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 PGLYRP1O75594 196 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-216ENST00000536548 ZNF205O95201 554 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 NAPSAO96009 420 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 OPN1LWP04000 364 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 RPLP1P05386 114 aaKnown RBP6.61□□□□□ -1.35
CPSF7-216ENST00000536548 SNRPCP09234 159 aaKnown RBP6.61□□□□□ -1.35
CPSF7-216ENST00000536548 LINC00614P0C842 121 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 FGF5P12034 268 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 TSPAN7P41732 249 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 CCL11P51671 97 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 CNN1P51911 297 aaKnown RBP6.61□□□□□ -1.35
CPSF7-216ENST00000536548 ERVS71-1P61550 626 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 TMEM267Q0VDI3 215 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-216ENST00000536548 GAGE1Q13065 139 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 ZNF726P1Q15940 193 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 KRTAP27-1Q3LI81 207 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 DMRTC1Q5HYR2 192 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 DCAF10Q5QP82 559 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 PHYHD1Q5SRE7 291 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 MKXQ8IYA7 352 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 KIR2DL5AQ8N109 375 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 GBGT1Q8N5D6 347 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 RBMXL3Q8N7X1 1067 aaKnown RBP6.61□□□□□ -1.35
CPSF7-216ENST00000536548 OR10G3Q8NGC4 313 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 OR2AE1Q8NHA4 323 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 PIGCQ92535 297 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 DEFB126Q9BYW3 111 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 WDR61Q9GZS3 305 aaKnown RBP6.61□□□□□ -1.35
CPSF7-216ENST00000536548 CCL28Q9NRJ3 127 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 ATP23Q9Y6H3 246 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 ZGRF1Q86YA3 2104 aa6.61□□□□□ -1.35
CPSF7-216ENST00000536548 CSPG4Q6UVK1 2322 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 NSD1Q96L73 2696 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-216ENST00000536548 A0A1W2PPQ1 181 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 MARCH11A6NNE9 402 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 RNF212BA8MTL3 300 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 DEGS1O15121 323 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 SCGB1D1O95968 90 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 GYPAP02724 150 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 TDGF1P3P51864 188 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 DSCR4P56555 118 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-216ENST00000536548 FGF12P61328 243 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 PPP1CBP62140 327 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 NKAIN1Q4KMZ8 207 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 MYO7BQ6PIF6 2116 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 BRICD5Q6PL45 260 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 WDR74Q6RFH5 385 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-216ENST00000536548 SHISA6Q6ZSJ9 500 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 MOB1BQ7L9L4 216 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 ZNF611Q8N823 705 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 MRPL30Q8TCC3 161 aaKnown RBP6.6□□□□□ -1.35
CPSF7-216ENST00000536548 NEK7Q8TDX7 302 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 TAF15Q92804 592 aaKnown RBP eCLIP6.6□□□□□ -1.35
CPSF7-216ENST00000536548 NEIL1Q96FI4 390 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-216ENST00000536548 PCGF1Q9BSM1 259 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 RSG1Q9BU20 258 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 SNHG12Q9BXW3 62 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 RBKSQ9H477 322 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 LIN7CQ9NUP9 197 aaKnown RBP6.6□□□□□ -1.35
CPSF7-216ENST00000536548 TMEM38BQ9NVV0 291 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 NAGKQ9UJ70 344 aa6.6□□□□□ -1.35
CPSF7-216ENST00000536548 OR2W1Q9Y3N9 320 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms