RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 RSG1Q9BU20 258 aa18.12■□□□□ 0.49
TRIM3-214ENST00000536344 ZNF816-ZNF321PA0A0X1KG74 233 aa18.12■□□□□ 0.49
TRIM3-214ENST00000536344 A0A1W2PPQ1 181 aa18.12■□□□□ 0.49
TRIM3-214ENST00000536344 ZNF732B4DXR9 585 aa18.12■□□□□ 0.49
TRIM3-214ENST00000536344 AQP7O14520 342 aa18.12■□□□□ 0.49
TRIM3-214ENST00000536344 RPLP1P05386 114 aaKnown RBP18.12■□□□□ 0.49
TRIM3-214ENST00000536344 ARR3P36575 388 aa18.12■□□□□ 0.49
TRIM3-214ENST00000536344 TFPI2P48307 235 aa18.12■□□□□ 0.49
TRIM3-214ENST00000536344 TLE4Q04727 773 aa18.12■□□□□ 0.49
TRIM3-214ENST00000536344 CNN3Q15417 329 aaKnown RBP18.12■□□□□ 0.49
TRIM3-214ENST00000536344 Q6ZSR3 168 aa18.12■□□□□ 0.49
TRIM3-214ENST00000536344 LRTM2Q8N967 370 aa18.12■□□□□ 0.49
TRIM3-214ENST00000536344 EXTL1Q92935 676 aa18.12■□□□□ 0.49
TRIM3-214ENST00000536344 VAX2Q9UIW0 290 aa18.12■□□□□ 0.49
TRIM3-214ENST00000536344 TMEM210A6NLX4 147 aa18.11■□□□□ 0.49
TRIM3-214ENST00000536344 SS18L1O75177 396 aaPredicted RBP18.11■□□□□ 0.49
TRIM3-214ENST00000536344 ECI1P42126 302 aa18.11■□□□□ 0.49
TRIM3-214ENST00000536344 IQCJQ1A5X6 159 aa18.11■□□□□ 0.49
TRIM3-214ENST00000536344 COA6Q5JTJ3 125 aaKnown RBP18.11■□□□□ 0.49
TRIM3-214ENST00000536344 ABHD17AQ96GS6 310 aa18.11■□□□□ 0.49
TRIM3-214ENST00000536344 REPIN1Q9BWE0 567 aaKnown RBP18.11■□□□□ 0.49
TRIM3-214ENST00000536344 PLEKHF2Q9H8W4 249 aa18.11■□□□□ 0.49
TRIM3-214ENST00000536344 RPRMQ9NS64 109 aa18.11■□□□□ 0.49
TRIM3-214ENST00000536344 DKK4Q9UBT3 224 aa18.11■□□□□ 0.49
TRIM3-214ENST00000536344 TGOLN2O43493 480 aa18.11■□□□□ 0.49
TRIM3-214ENST00000536344 NUPR1O60356 82 aa18.11■□□□□ 0.49
TRIM3-214ENST00000536344 NHLH1Q02575 133 aa18.11■□□□□ 0.49
TRIM3-214ENST00000536344 PRDX4Q13162 271 aa18.11■□□□□ 0.49
TRIM3-214ENST00000536344 ACSF3Q4G176 576 aaPredicted RBP18.11■□□□□ 0.49
TRIM3-214ENST00000536344 ARL6IP6Q8N6S5 226 aa18.11■□□□□ 0.49
TRIM3-214ENST00000536344 BCL2P10415 239 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 VAMP2P63027 116 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 ZNF726P1Q15940 193 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 C1orf194Q5T5A4 169 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 TMEM42Q69YG0 159 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 APOBEC3DQ96AK3 386 aaPredicted RBP18.1■□□□□ 0.49
TRIM3-214ENST00000536344 SPSB1Q96BD6 273 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 LYRM2Q9NU23 88 aaPredicted RBP18.1■□□□□ 0.49
TRIM3-214ENST00000536344 FKBP11Q9NYL4 201 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 IL36RNQ9UBH0 155 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 CEBPZOSA8MTT3 80 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 GFRA3O60609 400 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 UBE2NP61088 152 aaKnown RBP18.1■□□□□ 0.49
TRIM3-214ENST00000536344 PNRC1Q12796 327 aaPredicted RBP18.1■□□□□ 0.49
TRIM3-214ENST00000536344 MALLQ13021 153 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 ZNF611Q8N823 705 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 TMEM18Q96B42 140 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 NECAP2Q9NVZ3 263 aa18.1■□□□□ 0.49
TRIM3-214ENST00000536344 METTL15P1P0C7V9 234 aa18.09■□□□□ 0.49
TRIM3-214ENST00000536344 C10orf35Q96D05 121 aa18.09■□□□□ 0.49
TRIM3-214ENST00000536344 ZNF488Q96MN9 340 aa18.09■□□□□ 0.49
TRIM3-214ENST00000536344 LPAR2Q9HBW0 351 aa18.09■□□□□ 0.49
TRIM3-214ENST00000536344 DOCK11Q5JSL3 2073 aa18.09■□□□□ 0.49
TRIM3-214ENST00000536344 PPP5D1E7EU14 171 aa18.09■□□□□ 0.49
TRIM3-214ENST00000536344 HNF4GQ14541 408 aa18.09■□□□□ 0.49
TRIM3-214ENST00000536344 SEM1Q6ZVN7 128 aa18.09■□□□□ 0.49
TRIM3-214ENST00000536344 TMEM256Q8N2U0 113 aa18.09■□□□□ 0.49
TRIM3-214ENST00000536344 OR51G1Q8NGK1 321 aa18.09■□□□□ 0.49
TRIM3-214ENST00000536344 SPSB4Q96A44 273 aa18.09■□□□□ 0.49
TRIM3-214ENST00000536344 SH3BGRL2Q9UJC5 107 aa18.09■□□□□ 0.49
TRIM3-214ENST00000536344 ADAM20O43506 726 aa18.08■□□□□ 0.49
TRIM3-214ENST00000536344 ARL6IP1Q15041 203 aa18.08■□□□□ 0.49
TRIM3-214ENST00000536344 ALKBH6Q3KRA9 238 aa18.08■□□□□ 0.49
TRIM3-214ENST00000536344 ZNF787Q6DD87 383 aa18.08■□□□□ 0.49
TRIM3-214ENST00000536344 SDSLQ96GA7 329 aa18.08■□□□□ 0.49
TRIM3-214ENST00000536344 TM2D1Q9BX74 207 aa18.08■□□□□ 0.49
TRIM3-214ENST00000536344 FZR1Q9UM11 496 aa18.08■□□□□ 0.49
TRIM3-214ENST00000536344 HSPB6O14558 160 aa18.08■□□□□ 0.48
TRIM3-214ENST00000536344 SPACA3Q8IXA5 215 aa18.08■□□□□ 0.48
TRIM3-214ENST00000536344 KIR2DL5BA0A0G2JN68 375 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 KIR2DL5BA0A0G2JPC4 375 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 CD300LBA8K4G0 201 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 ZNF705FA8MVS1 300 aaPredicted RBP18.07■□□□□ 0.48
TRIM3-214ENST00000536344 ZNF705DP0CH99 300 aaPredicted RBP18.07■□□□□ 0.48
TRIM3-214ENST00000536344 ZNF705BP0CI00 300 aaPredicted RBP18.07■□□□□ 0.48
TRIM3-214ENST00000536344 CA6P23280 308 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 PDLIM4P50479 330 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 Q6ZPA2 131 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 Q6ZS92 163 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 LHFPL2Q6ZUX7 228 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 KIR2DL5AQ8N109 375 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 Q96M66 194 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 RBKSQ9H477 322 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 CISD1Q9NZ45 108 aaKnown RBP18.07■□□□□ 0.48
TRIM3-214ENST00000536344 ST3GAL6Q9Y274 331 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 PPIAL4AQ9Y536 164 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 TCF21O43680 179 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 CHST1O43916 411 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 HPRT1P00492 218 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 GALR1P47211 349 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 FUT6P51993 359 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 RPP30P78346 268 aaKnown RBP18.07■□□□□ 0.48
TRIM3-214ENST00000536344 ZNF573Q86YE8 665 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 GNPNAT1Q96EK6 184 aaPredicted RBP18.07■□□□□ 0.48
TRIM3-214ENST00000536344 OR2J1Q9GZK6 312 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 HBE1P02100 147 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 AADACP22760 399 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 FAM189A2Q15884 450 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 TMEM170AQ8WVE7 144 aa18.07■□□□□ 0.48
TRIM3-214ENST00000536344 HOXA4Q00056 320 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms