RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 RITA1Q96K30 269 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 MRPS7Q9Y2R9 242 aaKnown RBP9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 MOB4Q9Y3A3 225 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 SMIM31A0A1B0GVY4 71 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 CCDC160A6NGH7 325 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 H0YJW9 148 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 HAX1O00165 279 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 TUSC2O75896 110 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 MOSP00540 346 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 LPLP06858 475 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 CTXN2P0C2S0 81 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 NAT1P18440 290 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 CNTFRP26992 372 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 PRSS3P35030 304 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 CBX5P45973 191 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 GPR12P47775 334 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 F2RL1P55085 397 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 FAM131AQ6UXB0 335 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 Q8N9W7 124 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 ZNF383Q8NA42 475 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 OR2T6Q8NHC8 308 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 AKR1E2Q96JD6 320 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 ABHD1Q96SE0 405 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 S1PR3Q99500 378 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 PRSS22Q9GZN4 317 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 GHITMQ9H3K2 345 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 IFT46Q9NQC8 304 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 SDHAF2Q9NX18 166 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 EXTL2Q9UBQ6 330 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 ZNF221Q9UK13 617 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 ADAM30Q9UKF2 790 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 OR2W1Q9Y3N9 320 aa8.99□□□□□ -0.97
TNFRSF1A-208ENST00000536194 J3QRK9 145 aa8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 M0QZK8 103 aa8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 RGS5O15539 181 aa8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 IGLV2-14P01704 120 aa8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 ARPC4P59998 168 aa8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 HIST2H2BDQ6DRA6 164 aa8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 LYSMD2Q8IV50 215 aa8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 OR5AP2Q8NGF4 316 aa8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 OR5AN1Q8NGI8 311 aa8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 WIPF2Q8TF74 440 aaPredicted RBP8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 CITED1Q99966 193 aa8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 DCUN1D5Q9BTE7 237 aa8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 WNT10AQ9GZT5 417 aa8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 NXF2Q9GZY0 626 aaKnown RBP8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 RSL24D1Q9UHA3 163 aaKnown RBP8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 GAB2Q9UQC2 676 aa8.98□□□□□ -0.97
TNFRSF1A-208ENST00000536194 OR5H14A6NHG9 310 aa8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 ZNF701M0R085 212 aaPredicted RBP8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 M0R1X1 148 aa8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 FGF16O43320 207 aa8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 OR5H8P0DN80 308 aa8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 AADACP22760 399 aa8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 RFX2P48378 723 aa8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 ACTBP60709 375 aa8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 CDK10Q15131 360 aa8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 RNASE12Q5GAN4 147 aaKnown RBP8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 FOXB2Q5VYV0 432 aa8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 ZNF660Q6AZW8 331 aaPredicted RBP8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 FAM71E2Q8N5Q1 922 aa8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 KLHDC1Q8N7A1 406 aa8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 C6orf62Q9GZU0 229 aaPredicted RBP8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 SCPEP1Q9HB40 452 aa8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 NECAP2Q9NVZ3 263 aa8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 RBM7Q9Y580 266 aaKnown RBP8.97□□□□□ -0.97
TNFRSF1A-208ENST00000536194 DPPA5A6NC42 116 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 LINC01548A6NM66 108 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 NCBP2LA6PVI3 153 aaKnown RBP8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 LINC00473A8K010 186 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 SULT1C2O00338 296 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 PPYP01298 95 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 PMP2P02689 132 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 IGKV1-16P04430 117 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 VSIG10L2P0DP72 767 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 FCGR2CP31995 323 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 LUMP51884 338 aaPredicted RBP8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 EIF4EBP1Q13541 118 aaPredicted RBP8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 MMDQ15546 238 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 SHISA2Q6UWI4 295 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 OVCH2Q7RTZ1 564 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 ZNF645Q8N7E2 425 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 OR8H1Q8NGG4 311 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 OR52I2Q8NH67 350 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 MCFD2Q8NI22 146 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 DDB2Q92466 427 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 HSPB9Q9BQS6 159 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 LIN7CQ9NUP9 197 aaKnown RBP8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 EHFQ9NZC4 300 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 WASHC3Q9Y3C0 194 aa8.96□□□□□ -0.98
TNFRSF1A-208ENST00000536194 TET2Q6N021 2002 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF1A-208ENST00000536194 NBR2O15453 112 aa8.95□□□□□ -0.98
TNFRSF1A-208ENST00000536194 TPPPO94811 219 aa8.95□□□□□ -0.98
TNFRSF1A-208ENST00000536194 NDUFA3O95167 84 aa8.95□□□□□ -0.98
TNFRSF1A-208ENST00000536194 HLA-DMAP28067 261 aa8.95□□□□□ -0.98
TNFRSF1A-208ENST00000536194 MC5RP33032 325 aa8.95□□□□□ -0.98
TNFRSF1A-208ENST00000536194 DUTP33316 252 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-208ENST00000536194 HRH1P35367 487 aa8.95□□□□□ -0.98
TNFRSF1A-208ENST00000536194 VDAC2P45880 294 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms