RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 RPL30P62888 115 aaKnown RBP11.17□□□□□ -0.62
VPS33B-202ENST00000535906 TLE4Q04727 773 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 MZT1Q08AG7 82 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 GCSAMQ8N6F7 178 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 OR2V2Q96R30 315 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 IGHV3-43A0A0B4J1X8 118 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 A0A1W2PPH5 198 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 A8MXE2 369 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 ZNF737O75373 536 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 IGHV3-43DP0DP04 118 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 AGAP20933 346 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 KLF3P57682 345 aaPredicted RBP11.17□□□□□ -0.62
VPS33B-202ENST00000535906 ZGRF1Q86YA3 2104 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 FGFRL1Q8N441 504 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 ZNF808Q8N4W9 903 aaPredicted RBP11.17□□□□□ -0.62
VPS33B-202ENST00000535906 ZNF561Q8N587 486 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 NINJ1Q92982 152 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 TOLLIPQ9H0E2 274 aa11.17□□□□□ -0.62
VPS33B-202ENST00000535906 PLCE1Q9P212 2302 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 CUL9Q8IWT3 2517 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 SYNGR2O43760 224 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 IFNA5P01569 189 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 HBE1P02100 147 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 TMEM267Q0VDI3 215 aaPredicted RBP11.16□□□□□ -0.62
VPS33B-202ENST00000535906 EIF4EBP1Q13541 118 aaPredicted RBP11.16□□□□□ -0.62
VPS33B-202ENST00000535906 EDDM3AQ14507 147 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 RBMXL1Q96E39 390 aaKnown RBP11.16□□□□□ -0.62
VPS33B-202ENST00000535906 LURAP1Q96LR2 239 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 TP53TG5Q9Y2B4 290 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 IGHV3OR15-7A0A075B7D8 119 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 DEFB108AA8MXU0 73 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 SPRY3O43610 288 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 SRP19P09132 144 aaKnown RBP11.16□□□□□ -0.62
VPS33B-202ENST00000535906 CFHR2P36980 270 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 BRWD1-AS2P59051 145 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 RAB2AP61019 212 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 C3orf36Q3SXR2 165 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 OR2B11Q5JQS5 317 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 MOGAT3Q86VF5 341 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 MEGF10Q96KG7 1140 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 C12orf57Q99622 126 aa11.16□□□□□ -0.62
VPS33B-202ENST00000535906 PUS1Q9Y606 427 aaKnown RBP eCLIP11.16□□□□□ -0.62
VPS33B-202ENST00000535906 IGLV3-9A0A075B6K5 115 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 A0A1W2PPE2 198 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 RNF212BA8MTL3 300 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 C15orf65H3BRN8 121 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 SCAF4O95104 1147 aaKnown RBP11.15□□□□□ -0.62
VPS33B-202ENST00000535906 HSPB1P04792 205 aaKnown RBP11.15□□□□□ -0.62
VPS33B-202ENST00000535906 ARG1P05089 322 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 IAPPP10997 89 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 RAB5AP20339 215 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 SNRPEP62304 92 aaKnown RBP11.15□□□□□ -0.62
VPS33B-202ENST00000535906 ICAM4Q14773 271 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 HAGHQ16775 308 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 ZNF506Q5JVG8 444 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 BTNL3Q6UXE8 466 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 THNSL2Q86YJ6 484 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 DOLPP1Q86YN1 238 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 ZBTB34Q8NCN2 500 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 CEP295Q9C0D2 2601 aa11.15□□□□□ -0.62
VPS33B-202ENST00000535906 PCP4L1A6NKN8 68 aa11.15□□□□□ -0.63
VPS33B-202ENST00000535906 TDGF1P3P51864 188 aa11.15□□□□□ -0.63
VPS33B-202ENST00000535906 LINC00205P59089 165 aa11.15□□□□□ -0.63
VPS33B-202ENST00000535906 PAX5Q02548 391 aa11.15□□□□□ -0.63
VPS33B-202ENST00000535906 SLC25A24Q6NUK1 477 aa11.15□□□□□ -0.63
VPS33B-202ENST00000535906 CISD2Q8N5K1 135 aaKnown RBP11.15□□□□□ -0.63
VPS33B-202ENST00000535906 FAM24BQ8N5W8 94 aa11.15□□□□□ -0.63
VPS33B-202ENST00000535906 ZNRF1Q8ND25 227 aa11.15□□□□□ -0.63
VPS33B-202ENST00000535906 CLDND2Q8NHS1 167 aa11.15□□□□□ -0.63
VPS33B-202ENST00000535906 ITLN1Q8WWA0 313 aa11.15□□□□□ -0.63
VPS33B-202ENST00000535906 MRPL37Q9BZE1 423 aaKnown RBP11.15□□□□□ -0.63
VPS33B-202ENST00000535906 PSENENQ9NZ42 101 aa11.15□□□□□ -0.63
VPS33B-202ENST00000535906 ADGRG4Q8IZF6 3080 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 TRAV1-1A0A0B4J248 108 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 C5orf52A6NGY3 159 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 CCKARP32238 428 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 MAS1LP35410 378 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 ZNF816Q0VGE8 651 aaPredicted RBP11.14□□□□□ -0.63
VPS33B-202ENST00000535906 FOXC1Q12948 553 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 LTC4SQ16873 150 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 Q8NA96 180 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 MALSU1Q96EH3 234 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 AGMATQ9BSE5 352 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 SSUH2Q9Y2M2 353 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 A0A0G2JNJ9 132 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 hCG_1809904A0A1W2PP81 198 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 A0A1W2PR64 198 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 A0A1W2PRV1 198 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 C17orf98A8MV24 154 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 H3BQ15 152 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 KRASP01116 189 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 LHBP01229 141 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 G6PCP35575 357 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 RPS23P62266 143 aaKnown RBP11.14□□□□□ -0.63
VPS33B-202ENST00000535906 FAM201AQ5SY85 155 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 Q9UFV3 132 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 MMP24Q9Y5R2 645 aa11.14□□□□□ -0.63
VPS33B-202ENST00000535906 ST8SIA5O15466 376 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 SPINT2O43291 252 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 S100A6P06703 90 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms