RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 CCDC144NLQ6NUI1 221 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 LPCAT3Q6P1A2 487 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 TGIF2LXQ8IUE1 241 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 ZNF645Q8N7E2 425 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 RTN4IP1Q8WWV3 396 aaPredicted RBP12.58□□□□□ -0.4
CNN1-202ENST00000535659 TOMM40LQ969M1 308 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 C7orf50Q9BRJ6 194 aaKnown RBP12.58□□□□□ -0.4
CNN1-202ENST00000535659 PRDM13Q9H4Q3 707 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 CCL28Q9NRJ3 127 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 SDHAF2Q9NX18 166 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 SLC2A8Q9NY64 477 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 SCP2D1Q9UJQ7 156 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 NSD1Q96L73 2696 aaPredicted RBP12.58□□□□□ -0.4
CNN1-202ENST00000535659 IGLV2-14P01704 120 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 REG1BP48304 166 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 IFITM3Q01628 133 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 TUSC1Q2TAM9 212 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 FAM71F2Q6NXP2 309 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 IDO2Q6ZQW0 420 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 IGHV1-3A0A0C4DH29 117 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 TXNL1O43396 289 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 FAM157CP0CG43 387 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 GNRHRP30968 328 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 MSMO1Q15800 293 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 PLA1AQ53H76 456 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 Q6YL49 198 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 OR8H3Q8N146 312 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 DRAM1Q8N682 238 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 ZBTB34Q8NCN2 500 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 BORCS5Q969J3 196 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 ZDHHC16Q969W1 377 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 AKR1E2Q96JD6 320 aa12.57□□□□□ -0.4
CNN1-202ENST00000535659 ZNF48Q96MX3 618 aaPredicted RBP12.57□□□□□ -0.4
CNN1-202ENST00000535659 MDFIC2A0A1B0GVS7 189 aa12.56□□□□□ -0.4
CNN1-202ENST00000535659 CT45A6P0DMU7 189 aa12.56□□□□□ -0.4
CNN1-202ENST00000535659 CT45A5P0DMU8 189 aa12.56□□□□□ -0.4
CNN1-202ENST00000535659 CT45A7P0DMV0 189 aa12.56□□□□□ -0.4
CNN1-202ENST00000535659 ARHGDIBP52566 201 aa12.56□□□□□ -0.4
CNN1-202ENST00000535659 AANATQ16613 207 aa12.56□□□□□ -0.4
CNN1-202ENST00000535659 MOB3BQ86TA1 216 aa12.56□□□□□ -0.4
CNN1-202ENST00000535659 MRGPRFQ96AM1 343 aa12.56□□□□□ -0.4
CNN1-202ENST00000535659 FXYD6Q9H0Q3 95 aa12.56□□□□□ -0.4
CNN1-202ENST00000535659 OCEL1Q9H607 264 aa12.56□□□□□ -0.4
CNN1-202ENST00000535659 A0A1W2PPI3 338 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 VGLL3A8MV65 326 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 M0R1X1 148 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 LYRM1O43325 122 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 BRS3P32247 399 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 ECI1P42126 302 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 RAB13P51153 203 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 C16orf87Q6PH81 154 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 RBMS3Q6XE24 437 aaKnown RBP12.55□□□□□ -0.4
CNN1-202ENST00000535659 ZNF818PQ6ZRF7 136 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 SLC38A6Q8IZM9 456 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 SIGLECL1Q8N7X8 197 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 DRAXINQ8NBI3 349 aaPredicted RBP12.55□□□□□ -0.4
CNN1-202ENST00000535659 BVESQ8NE79 360 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 OR13C8Q8NGS7 320 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 ZFAND1Q8TCF1 268 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 MARCH1Q8TCQ1 289 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 C5orf30Q96GV9 206 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 SSX3Q99909 188 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 NABP2Q9BQ15 211 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 RSRP1Q9BUV0 290 aa12.55□□□□□ -0.4
CNN1-202ENST00000535659 MRPL20Q9BYC9 149 aaKnown RBP12.55□□□□□ -0.4
CNN1-202ENST00000535659 GPR31O00270 319 aa12.54□□□□□ -0.4
CNN1-202ENST00000535659 TIMM23O14925 209 aa12.54□□□□□ -0.4
CNN1-202ENST00000535659 PGAM2P15259 253 aa12.54□□□□□ -0.4
CNN1-202ENST00000535659 DYNLT3P51808 116 aa12.54□□□□□ -0.4
CNN1-202ENST00000535659 LINC00205P59089 165 aa12.54□□□□□ -0.4
CNN1-202ENST00000535659 ASAH1Q13510 395 aa12.54□□□□□ -0.4
CNN1-202ENST00000535659 SURF2Q15527 256 aaPredicted RBP12.54□□□□□ -0.4
CNN1-202ENST00000535659 CMTM1Q8IZ96 169 aa12.54□□□□□ -0.4
CNN1-202ENST00000535659 SCGB3A2Q96PL1 93 aa12.54□□□□□ -0.4
CNN1-202ENST00000535659 TBC1D24Q9ULP9 559 aa12.54□□□□□ -0.4
CNN1-202ENST00000535659 GPR132Q9UNW8 380 aa12.54□□□□□ -0.4
CNN1-202ENST00000535659 FN1P02751 2386 aaKnown RBP12.54□□□□□ -0.4
CNN1-202ENST00000535659 DUTP33316 252 aaKnown RBP12.53□□□□□ -0.4
CNN1-202ENST00000535659 IER3P46695 156 aa12.53□□□□□ -0.4
CNN1-202ENST00000535659 CCR6P51684 374 aa12.53□□□□□ -0.4
CNN1-202ENST00000535659 BAMBIQ13145 260 aa12.53□□□□□ -0.4
CNN1-202ENST00000535659 EIF4EBP1Q13541 118 aaPredicted RBP12.53□□□□□ -0.4
CNN1-202ENST00000535659 HABP2Q14520 560 aaPredicted RBP12.53□□□□□ -0.4
CNN1-202ENST00000535659 LRRC75BQ2VPJ9 315 aa12.53□□□□□ -0.4
CNN1-202ENST00000535659 ZNF66Q6ZN08 573 aa12.53□□□□□ -0.4
CNN1-202ENST00000535659 THNSL2Q86YJ6 484 aa12.53□□□□□ -0.4
CNN1-202ENST00000535659 PIFOQ8TCI5 191 aa12.53□□□□□ -0.4
CNN1-202ENST00000535659 CFHR4Q92496 578 aa12.53□□□□□ -0.4
CNN1-202ENST00000535659 ZNF486Q96H40 463 aaPredicted RBP12.53□□□□□ -0.4
CNN1-202ENST00000535659 ADTRPQ96IZ2 230 aa12.53□□□□□ -0.4
CNN1-202ENST00000535659 HSD17B10Q99714 261 aaKnown RBP12.53□□□□□ -0.4
CNN1-202ENST00000535659 SLC25A21Q9BQT8 299 aaPredicted RBP12.53□□□□□ -0.4
CNN1-202ENST00000535659 DPAGT1Q9H3H5 408 aa12.53□□□□□ -0.4
CNN1-202ENST00000535659 IGHV3-72A0A0B4J1Y9 119 aa12.52□□□□□ -0.4
CNN1-202ENST00000535659 FAM90A9PA6NNJ1 464 aa12.52□□□□□ -0.4
CNN1-202ENST00000535659 TNFSF12O43508 249 aa12.52□□□□□ -0.4
CNN1-202ENST00000535659 PGLYRP1O75594 196 aaPredicted RBP12.52□□□□□ -0.4
CNN1-202ENST00000535659 CD1BP29016 333 aa12.52□□□□□ -0.4
CNN1-202ENST00000535659 MC5RP33032 325 aa12.52□□□□□ -0.4
CNN1-202ENST00000535659 BTCP35070 178 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms