RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 HIST1H2BJP06899 126 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 HIST1H2BOP23527 126 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 HIST1H2BBP33778 126 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 HIST1H2BDP58876 126 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 TPPP2P59282 170 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 HIST1H2BCP62807 126 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 HIST2H2BEQ16778 126 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.55□□□□□ -0.72
BDNF-218ENST00000533246 LRRC75AQ8NAA5 344 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 OR1P1Q8NH06 330 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 HIST1H2BHQ93079 126 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 HIST1H2BNQ99877 126 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 HIST1H2BMQ99879 126 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 OR51I2Q9H344 312 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 CLDN16Q9Y5I7 305 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 CHCHD2Q9Y6H1 151 aaPredicted RBP10.55□□□□□ -0.72
BDNF-218ENST00000533246 J3QW42 95 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 CCL8P80075 99 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 VAX1Q5SQQ9 334 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 ZNF880Q6PDB4 577 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 NTNG2Q96CW9 530 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 ABHD14BQ96IU4 210 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 OR1A1Q9P1Q5 309 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 RBFOX3A6NFN3 312 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 C21orf140B9A014 251 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 H3BQ15 152 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 COX7A1P24310 79 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 TMEM50BP56557 158 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 TMEM211Q6ICI0 200 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 HIST1H2BLQ99880 126 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 HIF1ANQ9NWT6 349 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 ZNF319Q9P2F9 582 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 OR2W1Q9Y3N9 320 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 MSGN1A6NI15 193 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 BTCP35070 178 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 SUCLG1P53597 346 aaKnown RBP10.54□□□□□ -0.72
BDNF-218ENST00000533246 RPL11P62913 178 aaKnown RBP10.54□□□□□ -0.72
BDNF-218ENST00000533246 FBLN7Q53RD9 439 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 NIT1Q86X76 327 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 HIST3H2BBQ8N257 126 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 TCTEX1D1Q8N7M0 179 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 TAAR6Q96RI8 345 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 RSG1Q9BU20 258 aa10.54□□□□□ -0.72
BDNF-218ENST00000533246 TMEM14DPA8MWL7 114 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 PLP1P60201 277 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 ERVS71-1P61550 626 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 NUFIP2Q7Z417 695 aaKnown RBP10.53□□□□□ -0.72
BDNF-218ENST00000533246 PPP1R32Q7Z5V6 425 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 SIGLEC12Q96PQ1 595 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 ZNF107Q9UII5 783 aaPredicted RBP10.53□□□□□ -0.72
BDNF-218ENST00000533246 FUT9Q9Y231 359 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 ZNF835Q9Y2P0 537 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 FAM157AC9JC47 383 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 ZNF737O75373 536 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 CT45A6P0DMU7 189 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 CT45A5P0DMU8 189 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 CT45A7P0DMV0 189 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 UBE2G1P62253 170 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 CT45A1Q5HYN5 189 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 OR10G4Q8NGN3 311 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 OR10G9Q8NGN4 311 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 OR10G7Q8NGN6 311 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 CT45A3Q8NHU0 189 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 RND1Q92730 232 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 CTDSP1Q9GZU7 261 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 IL36GQ9NZH8 169 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 CLN8Q9UBY8 286 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 OR2A4O95047 310 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 ADCYAP1P18509 176 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 IL3RAP26951 378 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 REG1BP48304 166 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 GAGE1Q13065 139 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 C10orf35Q96D05 121 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 OR2A7Q96R45 310 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 KCNIP2Q9NS61 270 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 ZSWIM8A7E2V4 1837 aa10.53□□□□□ -0.72
BDNF-218ENST00000533246 RPL36A-HNRNPH2H7BZ11 118 aa10.52□□□□□ -0.72
BDNF-218ENST00000533246 TMEM252Q8N6L7 170 aa10.52□□□□□ -0.72
BDNF-218ENST00000533246 OR52M1Q8NGK5 317 aa10.52□□□□□ -0.72
BDNF-218ENST00000533246 BOD1Q96IK1 185 aa10.52□□□□□ -0.72
BDNF-218ENST00000533246 ATP5SQ99766 215 aa10.52□□□□□ -0.72
BDNF-218ENST00000533246 SIP14410 1827 aa10.52□□□□□ -0.72
BDNF-218ENST00000533246 SCN8AQ9UQD0 1980 aa10.52□□□□□ -0.73
BDNF-218ENST00000533246 ZIC3O60481 467 aa10.52□□□□□ -0.73
BDNF-218ENST00000533246 TNFRSF1AP19438 455 aa10.52□□□□□ -0.73
BDNF-218ENST00000533246 USF1P22415 310 aaPredicted RBP10.52□□□□□ -0.73
BDNF-218ENST00000533246 FAM3AP98173 230 aa10.52□□□□□ -0.73
BDNF-218ENST00000533246 FDX2Q6P4F2 183 aa10.52□□□□□ -0.73
BDNF-218ENST00000533246 OR52L2PQ8NGH6 319 aa10.52□□□□□ -0.73
BDNF-218ENST00000533246 TMEM204Q9BSN7 226 aa10.52□□□□□ -0.73
BDNF-218ENST00000533246 G3V3Q6 166 aa10.52□□□□□ -0.73
BDNF-218ENST00000533246 DNPH1O43598 174 aa10.52□□□□□ -0.73
BDNF-218ENST00000533246 SUB1P53999 127 aaKnown RBP eCLIP10.52□□□□□ -0.73
BDNF-218ENST00000533246 MRPS11P82912 194 aaKnown RBP10.52□□□□□ -0.73
BDNF-218ENST00000533246 MMDQ15546 238 aa10.52□□□□□ -0.73
BDNF-218ENST00000533246 MYPOPQ86VE0 399 aaPredicted RBP10.52□□□□□ -0.73
BDNF-218ENST00000533246 GFI1Q99684 422 aa10.52□□□□□ -0.73
BDNF-218ENST00000533246 ZNF331Q9NQX6 463 aaPredicted RBP10.52□□□□□ -0.73
BDNF-218ENST00000533246 MYLKQ15746 1914 aa10.52□□□□□ -0.73
BDNF-218ENST00000533246 CHD3Q12873 2000 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms