RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 VAX1Q5SQQ9 334 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 BVESQ8NE79 360 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 VAX2Q9UIW0 290 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 TUBD1Q9UJT1 453 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 RAMP1O60894 148 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 DSCR9P59020 149 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 KHDC3LQ587J8 217 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 SLC35E3Q7Z769 313 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 C5orf17Q8NAS9 161 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 ALX4Q9H161 411 aaPredicted RBP9.67□□□□□ -0.86
PTPRK-221ENST00000532331 METRNQ9UJH8 293 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 CDRT15L2A8MXV6 281 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 TIMP3P35625 211 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 CAMPP49913 170 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 CXorf66Q5JRM2 361 aaPredicted RBP9.67□□□□□ -0.86
PTPRK-221ENST00000532331 OR11H7Q8NGC8 314 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 IGSF23A1L1A6 192 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 SRSF6Q13247 344 aaKnown RBP9.67□□□□□ -0.86
PTPRK-221ENST00000532331 PLA2G2CQ5R387 149 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 HSD17B13Q7Z5P4 300 aaPredicted RBP9.67□□□□□ -0.86
PTPRK-221ENST00000532331 FAM24BQ8N5W8 94 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 LINC00052Q96N35 136 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 TOLLIPQ9H0E2 274 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 KCNK7Q9Y2U2 307 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 AUP1Q9Y679 476 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 IL18BPO95998 194 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 EGR4Q05215 589 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 OR10G8Q8NGN5 311 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 ANAPC16Q96DE5 110 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 WFDC6Q9BQY6 131 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 LPAR5Q9H1C0 372 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 SLC2A8Q9NY64 477 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 UFC1Q9Y3C8 167 aa9.67□□□□□ -0.86
PTPRK-221ENST00000532331 GVINP1Q7Z2Y8 2422 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 DOCK6Q96HP0 2047 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 OR4D10Q8NGI6 311 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 LILRB1Q8NHL6 650 aaPredicted RBP9.66□□□□□ -0.86
PTPRK-221ENST00000532331 ANGPTL6Q8NI99 470 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 SCMH1Q96GD3 660 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 TEX50A0A1B0GTY4 177 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 ZNF729A6NN14 1252 aaPredicted RBP9.66□□□□□ -0.86
PTPRK-221ENST00000532331 DHRS7CA6NNS2 312 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 CXorf1O96002 111 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 HTN1P15515 57 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 Q1RN00 199 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 UNQ9370/PRO34162Q6UXP9 181 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 VAMP8Q9BV40 100 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 SEC11CQ9BY50 192 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 MTCL1Q9Y4B5 1905 aaKnown RBP9.66□□□□□ -0.86
PTPRK-221ENST00000532331 P01737 135 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 HIST1H1EP10412 219 aaKnown RBP9.66□□□□□ -0.86
PTPRK-221ENST00000532331 NRN1LQ496H8 165 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 STARD4Q96DR4 205 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 RIF1Q5UIP0 2472 aaKnown RBP9.66□□□□□ -0.86
PTPRK-221ENST00000532331 PINLYPA6NC86 204 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 PDE6DO43924 150 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 SLC25A53Q5H9E4 307 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 DNAJC13O75165 2243 aa9.66□□□□□ -0.86
PTPRK-221ENST00000532331 PHOX2AO14813 284 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 FAM157CP0CG43 387 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 NHLH2Q02577 135 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 TMEM30BQ3MIR4 351 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 COX19Q49B96 90 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 IGSF11Q5DX21 431 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 CALHM1Q8IU99 346 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 TCTEX1D1Q8N7M0 179 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 C17orf100A8MU93 164 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 THBDP07204 575 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 OR5AL1P0C617 328 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 COL8A1P27658 744 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 C1orf100Q5SVJ3 147 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 GLRX5Q86SX6 157 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 SAXO1Q8IYX7 474 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 AICDAQ9GZX7 198 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 CTXND1A0A1B0GTU2 59 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 H0Y980 276 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 ORM1P02763 201 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 LAMTOR1Q6IAA8 161 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 MMD2Q8IY49 270 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 ZNF645Q8N7E2 425 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 OR2T10Q8NGZ9 312 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 FAM206AQ9NX38 181 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 PTGDSP41222 190 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 IQCJQ1A5X6 159 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 C20orf204Q6ZNR8 217 aa9.65□□□□□ -0.86
PTPRK-221ENST00000532331 PDCD11Q14690 1871 aaKnown RBP9.65□□□□□ -0.87
PTPRK-221ENST00000532331 CSRP3P50461 194 aa9.65□□□□□ -0.87
PTPRK-221ENST00000532331 FAM106AQ4KMX7 169 aa9.65□□□□□ -0.87
PTPRK-221ENST00000532331 FAM74A3Q4VXF1 159 aa9.65□□□□□ -0.87
PTPRK-221ENST00000532331 RNFT1Q5M7Z0 435 aa9.65□□□□□ -0.87
PTPRK-221ENST00000532331 DGAT2L7PQ6IED9 249 aa9.65□□□□□ -0.87
PTPRK-221ENST00000532331 TOMM20LQ6UXN7 152 aa9.65□□□□□ -0.87
PTPRK-221ENST00000532331 HIGD1AQ9Y241 93 aa9.65□□□□□ -0.87
PTPRK-221ENST00000532331 A0A1W2PP11 408 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 PITX3O75364 302 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 SEC11BP0C7V7 166 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 RIGQ13278 110 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 C16orf82Q7Z2V1 217 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 C9orf62Q8N4C0 152 aa9.64□□□□□ -0.87
PTPRK-221ENST00000532331 ABHD14BQ96IU4 210 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms