RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 CFHR3Q02985 330 aa13.53□□□□□ -0.24
PKP3-208ENST00000531857 ZNF260Q3ZCT1 412 aa13.53□□□□□ -0.24
PKP3-208ENST00000531857 ELP2Q6IA86 826 aa13.53□□□□□ -0.24
PKP3-208ENST00000531857 FAM53AQ6NSI3 398 aaPredicted RBP13.53□□□□□ -0.24
PKP3-208ENST00000531857 ABHD1Q96SE0 405 aa13.53□□□□□ -0.24
PKP3-208ENST00000531857 C11orf54Q9H0W9 315 aaPredicted RBP13.53□□□□□ -0.24
PKP3-208ENST00000531857 SCPEP1Q9HB40 452 aa13.53□□□□□ -0.24
PKP3-208ENST00000531857 PLSCR3Q9NRY6 295 aa13.53□□□□□ -0.24
PKP3-208ENST00000531857 GAR1Q9NY12 217 aaKnown RBP13.53□□□□□ -0.24
PKP3-208ENST00000531857 TAS2R4Q9NYW5 299 aa13.53□□□□□ -0.24
PKP3-208ENST00000531857 ZNF107Q9UII5 783 aaPredicted RBP13.53□□□□□ -0.24
PKP3-208ENST00000531857 RAB22AQ9UL26 194 aa13.53□□□□□ -0.24
PKP3-208ENST00000531857 ZNF256Q9Y2P7 627 aaPredicted RBP13.53□□□□□ -0.24
PKP3-208ENST00000531857 RYR2Q92736 4967 aa13.52□□□□□ -0.24
PKP3-208ENST00000531857 ORC5O43913 435 aa13.52□□□□□ -0.25
PKP3-208ENST00000531857 ARSBP15848 533 aa13.52□□□□□ -0.25
PKP3-208ENST00000531857 FAUP35544 74 aaKnown RBP13.52□□□□□ -0.25
PKP3-208ENST00000531857 RFX2P48378 723 aa13.52□□□□□ -0.25
PKP3-208ENST00000531857 FHL3Q13643 280 aa13.52□□□□□ -0.25
PKP3-208ENST00000531857 C2orf76Q3KRA6 126 aa13.52□□□□□ -0.25
PKP3-208ENST00000531857 PIGYQ3MUY2 71 aa13.52□□□□□ -0.25
PKP3-208ENST00000531857 IZUMO1Q8IYV9 350 aa13.52□□□□□ -0.25
PKP3-208ENST00000531857 OR10A7Q8NGE5 316 aa13.52□□□□□ -0.25
PKP3-208ENST00000531857 OR2T10Q8NGZ9 312 aa13.52□□□□□ -0.25
PKP3-208ENST00000531857 TRIM63Q969Q1 353 aa13.52□□□□□ -0.25
PKP3-208ENST00000531857 HSPB9Q9BQS6 159 aa13.52□□□□□ -0.25
PKP3-208ENST00000531857 GON7Q9BXV9 100 aa13.52□□□□□ -0.25
PKP3-208ENST00000531857 HUWE1Q7Z6Z7 4374 aaKnown RBP13.52□□□□□ -0.25
PKP3-208ENST00000531857 ZNF736B4DX44 427 aaPredicted RBP13.51□□□□□ -0.25
PKP3-208ENST00000531857 ELANEP08246 267 aa13.51□□□□□ -0.25
PKP3-208ENST00000531857 PAX5Q02548 391 aa13.51□□□□□ -0.25
PKP3-208ENST00000531857 ARL6IP1Q15041 203 aa13.51□□□□□ -0.25
PKP3-208ENST00000531857 SBSPONQ8IVN8 264 aa13.51□□□□□ -0.25
PKP3-208ENST00000531857 CADM3Q8N126 398 aa13.51□□□□□ -0.25
PKP3-208ENST00000531857 TMEM104Q8NE00 496 aa13.51□□□□□ -0.25
PKP3-208ENST00000531857 OR10K1Q8NGX5 313 aa13.51□□□□□ -0.25
PKP3-208ENST00000531857 UBALD1Q8TB05 177 aa13.51□□□□□ -0.25
PKP3-208ENST00000531857 C4orf3Q8WVX3 66 aa13.51□□□□□ -0.25
PKP3-208ENST00000531857 SLC25A38Q96DW6 304 aa13.51□□□□□ -0.25
PKP3-208ENST00000531857 MARVELD1Q9BSK0 173 aa13.51□□□□□ -0.25
PKP3-208ENST00000531857 MRPS7Q9Y2R9 242 aaKnown RBP13.51□□□□□ -0.25
PKP3-208ENST00000531857 RBMX2Q9Y388 322 aaKnown RBP13.51□□□□□ -0.25
PKP3-208ENST00000531857 LY86O95711 162 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 DHFRP00374 187 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 IGHG4P01861 327 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 HLA-DMAP28067 261 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 LYPD6Q86Y78 171 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 JAGN1Q8N5M9 183 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 PXT1Q8NFP0 134 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 OR11H1Q8NG94 326 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 ST6GALNAC6Q969X2 333 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 RCHY1Q96PM5 261 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 S1PR3Q99500 378 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 NEURL2Q9BR09 285 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 NUBP2Q9Y5Y2 271 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 SMAD5-AS1Q9Y6J3 95 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 DNAH7Q8WXX0 4024 aa13.5□□□□□ -0.25
PKP3-208ENST00000531857 C15orf65H3BRN8 121 aa13.49□□□□□ -0.25
PKP3-208ENST00000531857 RBBP9O75884 186 aa13.49□□□□□ -0.25
PKP3-208ENST00000531857 MOSP00540 346 aa13.49□□□□□ -0.25
PKP3-208ENST00000531857 PSMB8P28062 276 aa13.49□□□□□ -0.25
PKP3-208ENST00000531857 F2RL1P55085 397 aa13.49□□□□□ -0.25
PKP3-208ENST00000531857 TAS2R20P59543 309 aa13.49□□□□□ -0.25
PKP3-208ENST00000531857 ACTBP60709 375 aa13.49□□□□□ -0.25
PKP3-208ENST00000531857 IL13RA2Q14627 380 aa13.49□□□□□ -0.25
PKP3-208ENST00000531857 ASPHD1Q5U4P2 390 aa13.49□□□□□ -0.25
PKP3-208ENST00000531857 FAM71E2Q8N5Q1 922 aa13.49□□□□□ -0.25
PKP3-208ENST00000531857 SUMF2Q8NBJ7 301 aa13.49□□□□□ -0.25
PKP3-208ENST00000531857 Q8NFD4 153 aa13.49□□□□□ -0.25
PKP3-208ENST00000531857 RTN4IP1Q8WWV3 396 aaPredicted RBP13.49□□□□□ -0.25
PKP3-208ENST00000531857 RASL11BQ9BPW5 248 aa13.49□□□□□ -0.25
PKP3-208ENST00000531857 DPCDQ9BVM2 203 aaPredicted RBP13.49□□□□□ -0.25
PKP3-208ENST00000531857 IGHV3-43A0A0B4J1X8 118 aa13.48□□□□□ -0.25
PKP3-208ENST00000531857 LDLRAD4O15165 306 aa13.48□□□□□ -0.25
PKP3-208ENST00000531857 IGHV3-43DP0DP04 118 aa13.48□□□□□ -0.25
PKP3-208ENST00000531857 VDAC1P21796 283 aa13.48□□□□□ -0.25
PKP3-208ENST00000531857 CD1BP29016 333 aa13.48□□□□□ -0.25
PKP3-208ENST00000531857 ZNF93P35789 620 aaPredicted RBP13.48□□□□□ -0.25
PKP3-208ENST00000531857 KCNJ3P48549 501 aa13.48□□□□□ -0.25
PKP3-208ENST00000531857 AKAP14Q86UN6 197 aa13.48□□□□□ -0.25
PKP3-208ENST00000531857 LINC00311Q8N616 119 aa13.48□□□□□ -0.25
PKP3-208ENST00000531857 DRAXINQ8NBI3 349 aaPredicted RBP13.48□□□□□ -0.25
PKP3-208ENST00000531857 OR51A2Q8NGJ7 313 aa13.48□□□□□ -0.25
PKP3-208ENST00000531857 KCNG3Q8TAE7 436 aa13.48□□□□□ -0.25
PKP3-208ENST00000531857 TNFAIP8L1Q8WVP5 186 aa13.48□□□□□ -0.25
PKP3-208ENST00000531857 FAM46BQ96A09 425 aa13.48□□□□□ -0.25
PKP3-208ENST00000531857 ORAI1Q96D31 301 aa13.48□□□□□ -0.25
PKP3-208ENST00000531857 A0A0B4J203 849 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 TMEM272A0A1B0GTI8 110 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 HMX3A6NHT5 357 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 SDCBPO00560 298 aaPredicted RBP13.47□□□□□ -0.25
PKP3-208ENST00000531857 SLC31A2O15432 143 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 HTR3BO95264 441 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 GZMHP20718 246 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 PRSS3P35030 304 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 KIAA0141Q14154 515 aaPredicted RBP13.47□□□□□ -0.25
PKP3-208ENST00000531857 GPR176Q14439 515 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 RSU1Q15404 277 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 OVCH2Q7RTZ1 564 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 MYOZ3Q8TDC0 251 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms