RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PAEPP09466 180 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 TDGF1P13385 188 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 CASP1P29466 404 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 G6PCP35575 357 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 MARCKSL1P49006 195 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 CTBP2P56545 445 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 DEFA1P59665 94 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 DEFA3P59666 94 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 RHOGP84095 191 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 PSG9Q00887 426 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 FABP9Q0Z7S8 132 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 IHHQ14623 411 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 RAB35Q15286 201 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 TCEAL5Q5H9L2 206 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 SPANXN3Q5MJ09 141 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 FAM183BPQ6ZVS7 135 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 SVBPQ8N300 66 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF491Q8N8L2 437 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 GPR26Q8NDV2 337 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 OR52E2Q8NGJ4 325 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 OR13C8Q8NGS7 320 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 OR1L1Q8NH94 360 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 OR5P3Q8WZ94 311 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 TMEM106AQ96A25 262 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 PTX4Q96A99 478 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 GPR146Q96CH1 333 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 DYNLL2Q96FJ2 89 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 SLC35E1Q96K37 410 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 BTN2A3PQ96KV6 586 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 MS4A4EQ96PG1 132 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 KIR2DL4Q99706 377 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 NRIP2Q9BQI9 281 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 ANAPC13Q9BS18 74 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 SMIM3Q9BZL3 60 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 NKX6-2Q9C056 277 aaPredicted RBP2.47□□□□□ -2.01
PTPRK-220ENST00000531466 GLIPR2Q9H4G4 154 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 RERGLQ9H628 205 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 VSIRQ9H7M9 311 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 POPDC3Q9HBV1 291 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 LHX9Q9NQ69 397 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 RBM22Q9NW64 420 aaKnown RBP eCLIP2.47□□□□□ -2.01
PTPRK-220ENST00000531466 DNAJC27Q9NZQ0 273 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 LAMTOR3Q9UHA4 124 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 NAT8Q9UHE5 227 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 UBIAD1Q9Y5Z9 338 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 LMTK2Q8IWU2 1503 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF608Q9ULD9 1512 aaPredicted RBP2.47□□□□□ -2.01
PTPRK-220ENST00000531466 AKAP12Q02952 1782 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 OVOS2A0A0G2JMS6 1433 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 IGHV3OR16-12A0A075B7B8 117 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 hADV38S2A0JD32 116 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 FABP5P3A8MUU1 101 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 EEF1E1-BLOC1S5C9J1V9 151 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 H3BMQ9 156 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 CCL25O15444 150 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 EEF1E1O43324 174 aaKnown RBP2.46□□□□□ -2.02
PTPRK-220ENST00000531466 UPK1BO75841 260 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 OR2H2O95918 312 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 PTHP01270 115 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 PFN1P07737 140 aaKnown RBP2.46□□□□□ -2.02
PTPRK-220ENST00000531466 SLC35G6P0C7Q6 338 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 HIST1H1DP16402 221 aaKnown RBP2.46□□□□□ -2.02
PTPRK-220ENST00000531466 IMPA1P29218 277 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 BRS3P32247 399 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 GABRA3P34903 492 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 GUCA1AP43080 201 aaPredicted RBP2.46□□□□□ -2.02
PTPRK-220ENST00000531466 KIR2DS2P43631 304 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 GALR1P47211 349 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 LHX2P50458 406 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 RPS25P62851 125 aaKnown RBP2.46□□□□□ -2.02
PTPRK-220ENST00000531466 GNG5P63218 68 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 SLC35A1P78382 337 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 ZNF85Q03923 595 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 ZNF181Q2M3W8 571 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 CEACAM16Q2WEN9 425 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 PYY3Q5JQD4 70 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 ZNF684Q5T5D7 378 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 APOOLQ6UXV4 268 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 SNX29P2Q8IUI4 249 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 C20orf196Q8IYI0 205 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 OR8I2Q8N0Y5 310 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 LINC01561Q8N1V8 128 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 PNKDQ8N490 385 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 OR4F17Q8NGA8 305 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 OR11H6Q8NGC7 330 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 PLEKHB2Q96CS7 222 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 C16orf74Q96GX8 76 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 BMFQ96LC9 184 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 HYLS1Q96M11 299 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 OR2M4Q96R27 311 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 OR4F4Q96R69 305 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 MGLLQ99685 303 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 RARRES2Q99969 163 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 MRPL45Q9BRJ2 306 aaKnown RBP2.46□□□□□ -2.02
PTPRK-220ENST00000531466 GINS4Q9BRT9 223 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 NDFIP1Q9BT67 221 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 EMC6Q9BV81 110 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 OR2J1Q9GZK6 312 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 CHST6Q9GZX3 395 aa2.46□□□□□ -2.02
PTPRK-220ENST00000531466 PBOV1Q9GZY1 135 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms