RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ADH1BP00325 375 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 LINC00271P0C7V0 271 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 CLDN17P56750 224 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 DAZAP2Q15038 168 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-214ENST00000530886 ZNF114Q8NC26 417 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 RCHY1Q96PM5 261 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 OR4C12Q96R67 309 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 PRRC2BQ5JSZ5 2229 aaKnown RBP6.89□□□□□ -1.31
CSDE1-214ENST00000530886 DOCK8Q8NF50 2099 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 TMEM189A5PLL7 270 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 SNURFLB1AK76 121 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 E9PLN8 166 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 MS4A18H0YCH9 400 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 POU2F2P09086 479 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 DUSP3P51452 185 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-214ENST00000530886 MS4A18Q3C1V0 323 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 Q5PR19 223 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 COLCA1Q6ZS62 124 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 OR10G9Q8NGN4 311 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 OR10G7Q8NGN6 311 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 QTRT1Q9BXR0 403 aaKnown RBP6.89□□□□□ -1.31
CSDE1-214ENST00000530886 PLEK2Q9NYT0 353 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 PCDH15Q96QU1 1955 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 MUC21A0A0G2JKD1 596 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 MUC21A0A140T8X8 626 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 GAGE10A6NGK3 116 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 SLC22A20A6NK97 555 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 SYNGR2O43760 224 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 UTS2O95399 124 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 MT-CO2P00403 227 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 SEC11AP67812 179 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 PRTGQ2VWP7 1150 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 MUC21Q5SSG8 566 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 TMEM136Q6ZRR5 245 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 FAM58AQ8N1B3 248 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 ZNF439Q8NDP4 499 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 FAM131CQ96AQ9 280 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 HCFC1R1Q9NWW0 138 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 WASHC3Q9Y3C0 194 aa6.89□□□□□ -1.31
CSDE1-214ENST00000530886 FAM181BA6NEQ2 426 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 C17orf51A8MQB3 221 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 C9JCJ5 164 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 K7EP34 96 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 TUSC2O75896 110 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 PMCHP20382 165 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 GRB2P62993 217 aaKnown RBP6.88□□□□□ -1.31
CSDE1-214ENST00000530886 HIST1H1AQ02539 215 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-214ENST00000530886 RPEL1Q2QD12 228 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 PHYHD1Q5SRE7 291 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 WDR82Q6UXN9 313 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 GATSQ8NAP1 163 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 OR10V1Q8NGI7 309 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 MBD6Q96DN6 1003 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 SIGMAR1Q99720 223 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 ZFYVE21Q9BQ24 234 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 ULBP2Q9BZM5 246 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 PSENENQ9NZ42 101 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 RARRES3Q9UL19 164 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 NCOA6Q14686 2063 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-214ENST00000530886 TRBV20OR9-2A0A075B6H5 130 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 OTOL1A6NHN0 477 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-214ENST00000530886 C2orf70A6NJV1 201 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 DHRS3O75911 302 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 NUDT3O95989 172 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 CXCL10P02778 98 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 CELA3BP08861 270 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 FCGR2AP12318 317 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 COX5AP20674 150 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 DRD1P21728 446 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 NPY1RP25929 384 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 CRYBB3P26998 211 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 IER3P46695 156 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 OR1D4P47884 311 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 CX3CL1P78423 397 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 KLF5Q13887 457 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-214ENST00000530886 VWC2Q2TAL6 325 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 TMEM14EPQ6UXP3 125 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 S100A7AQ86SG5 101 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 MTURNQ8N3F0 131 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 APOBEC3DQ96AK3 386 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-214ENST00000530886 LYZL4Q96KX0 146 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 TAAR6Q96RI8 345 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 SLC25A22Q9H936 323 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 STARD5Q9NSY2 213 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 LOC102724200A0A096LPH7 203 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-214ENST00000530886 TMED7-TICAM2A0A0A6YYA0 188 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 FAM90A26D6RGX4 464 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 NPIPA5E9PKD4 350 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 H0YGG7 62 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 M0R296 226 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 GNG7O60262 68 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 NAPSAO96009 420 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 HLA-DQA1P01909 254 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 HLA-DOBP13765 273 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 PGCP20142 388 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 AZU1P20160 251 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 ARF3P61204 181 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-214ENST00000530886 DLX2Q07687 328 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-214ENST00000530886 ZNF818PQ6ZRF7 136 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 OR5A1Q8NGJ0 315 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms