RNA–Protein interactions for RNA: ENST00000528906.5

PSMD13-208, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 858 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-208	ENST00000528906	MINOS1-NBL1	R4GNA1	71 aa		10.64	□□□□□ -0.71
PSMD13-208	ENST00000528906	DOCK11	Q5JSL3	2073 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	SAA2-SAA4	A0A096LPE2	208 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	C7orf66	A4D0T2	115 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	ODF3B	A8MYP8	253 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	RNASEK-C17orf49	H0YIS7	233 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	SFT2D2	O95562	160 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	ARG1	P05089	322 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	SAA2	P0DJI9	122 aa	Predicted RBP	10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	VSIG10L2	P0DP72	767 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	HOXB4	P17483	251 aa	Predicted RBP	10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	EPHA1	P21709	976 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	VAMP1	P23763	118 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	F2R	P25116	425 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	TAGLN	Q01995	201 aa	Known RBP	10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	HCP5	Q6MZN7	132 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	ZNF833P	Q6ZTB9	187 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	LYG2	Q86SG7	212 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	TBC1D26	Q86UD7	250 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	ODF3L1	Q8IXM7	274 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	CD300LF	Q8TDQ1	290 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	ZNF431	Q8TF32	576 aa	Predicted RBP	10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	CAPSL	Q8WWF8	208 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	LHX4	Q969G2	390 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	ST6GALNAC6	Q969X2	333 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	TMEM230	Q96A57	120 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	ZNF251	Q9BRH9	671 aa		10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	FAM212B	Q9NTI7	297 aa	Predicted RBP	10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	TBL2	Q9Y4P3	447 aa	Known RBP	10.63	□□□□□ -0.71
PSMD13-208	ENST00000528906	C3orf85	A0A1B0GTC6	90 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	C9orf170	A2RU37	121 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	OOSP1	A8MZH6	123 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906		M0R1X1	148 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	TXNL1	O43396	289 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	CREBL2	O60519	120 aa	Predicted RBP	10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	DUS4L	O95620	317 aa	Known RBP	10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	IFNA2	P01563	188 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	HLA-A	P01891	365 aa	Known RBP	10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	GAPDH	P04406	335 aa	Known RBP	10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	DUT	P33316	252 aa	Known RBP	10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	THBS3	P49746	956 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	BPIFB3	P59826	476 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	SRPX	P78539	464 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	DHRS2	Q13268	280 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	PPP1R1A	Q13522	171 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	MIDN	Q504T8	468 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	OR4P4	Q8NGL7	312 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	LIN7C	Q9NUP9	197 aa	Known RBP	10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	PRELID3B	Q9Y3B1	194 aa		10.62	□□□□□ -0.71
PSMD13-208	ENST00000528906	MYO9A	B2RTY4	2548 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906		A0A0A6YYJ9	748 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906		A0A0B4J2A0	478 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	CENPVL3	A0A0U1RRI6	287 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906		H0Y980	276 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	LY6L	H3BQJ8	138 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	SMAD7	O15105	426 aa	Known RBP	10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	TNFSF12	O43508	249 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	PROP1	O75360	226 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	KIR2DS2	P43631	304 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	DLX1	P56177	255 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	SUPT4H1	P63272	117 aa	Known RBP	10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	KLRD1	Q13241	179 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	RPL39P5	Q59GN2	51 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	GPR157	Q5UAW9	335 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	CCDC144NL	Q6NUI1	221 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	TGIF2LX	Q8IUE1	241 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	CIART	Q8N365	385 aa	Predicted RBP	10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	COQ8A	Q8NI60	647 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	MITD1	Q8WV92	249 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	RPE	Q96AT9	228 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	PHB2	Q99623	299 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	SEC22C	Q9BRL7	303 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	OR51J1	Q9H342	316 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	SHPK	Q9UHJ6	478 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	ALG5	Q9Y673	324 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	WNK2	Q9Y3S1	2297 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	CSPG4	Q6UVK1	2322 aa		10.61	□□□□□ -0.71
PSMD13-208	ENST00000528906	ITPR3	Q14573	2671 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	IGHV1-69D	A0A0B4J2H0	117 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	IGHV1-69	P01742	117 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	SERPINE2	P07093	398 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	CT45A6	P0DMU7	189 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	CT45A5	P0DMU8	189 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	CT45A7	P0DMV0	189 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	RRAS	P10301	218 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	RPA2	P15927	270 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	ZNF16	P17020	682 aa	Predicted RBP	10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	MC5R	P33032	325 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	PRB3	Q04118	309 aa	Predicted RBP	10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	ZNF816	Q0VGE8	651 aa	Predicted RBP	10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	CBX3	Q13185	183 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	TPTE2P1	Q5T6R2	138 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	OR51H1	Q8NH63	302 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	CASTOR1	Q8WTX7	329 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	TCTEX1D2	Q8WW35	142 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	MALSU1	Q96EH3	234 aa		10.6	□□□□□ -0.71
PSMD13-208	ENST00000528906	C5orf30	Q96GV9	206 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms