RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SCGNO76038 276 aa11.16□□□□□ -0.62
CAPN1-212ENST00000527887 RAB6AP20340 208 aa11.16□□□□□ -0.62
CAPN1-212ENST00000527887 CHATP28329 748 aa11.16□□□□□ -0.62
CAPN1-212ENST00000527887 RPS27AP62979 156 aaKnown RBP11.16□□□□□ -0.62
CAPN1-212ENST00000527887 PITPNAQ00169 270 aa11.16□□□□□ -0.62
CAPN1-212ENST00000527887 KIR2DS1Q14954 304 aa11.16□□□□□ -0.62
CAPN1-212ENST00000527887 PYHIN1Q6K0P9 492 aa11.16□□□□□ -0.62
CAPN1-212ENST00000527887 FAM53AQ6NSI3 398 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-212ENST00000527887 FAM71F2Q6NXP2 309 aa11.16□□□□□ -0.62
CAPN1-212ENST00000527887 C8orf86Q6ZUL3 223 aa11.16□□□□□ -0.62
CAPN1-212ENST00000527887 FAM46BQ96A09 425 aa11.16□□□□□ -0.62
CAPN1-212ENST00000527887 FAM3DQ96BQ1 224 aa11.16□□□□□ -0.62
CAPN1-212ENST00000527887 S100A16Q96FQ6 103 aaKnown RBP11.16□□□□□ -0.62
CAPN1-212ENST00000527887 TM2D1Q9BX74 207 aa11.16□□□□□ -0.62
CAPN1-212ENST00000527887 TMEM59Q9BXS4 323 aa11.16□□□□□ -0.62
CAPN1-212ENST00000527887 ZNF736B4DX44 427 aaPredicted RBP11.15□□□□□ -0.62
CAPN1-212ENST00000527887 K7EIL1 84 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 LDLRAD4O15165 306 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 CTDSPLO15194 276 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 UPK1BO75841 260 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 IGHG4P01861 327 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 VSIG8P0DPA2 414 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 SNRPBP14678 240 aaKnown RBP11.15□□□□□ -0.62
CAPN1-212ENST00000527887 ARSBP15848 533 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 ELK1P19419 428 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 VDAC1P21796 283 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 MRPS10P82664 201 aaKnown RBP11.15□□□□□ -0.62
CAPN1-212ENST00000527887 HES5Q5TA89 166 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 HACD4Q5VWC8 232 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 CNIH2Q6PI25 160 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 FAM131AQ6UXB0 335 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 OR8U1Q8NH10 309 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 LGALS14Q8TCE9 139 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 SRRQ9GZT4 340 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 MGAT4AQ9UM21 535 aa11.15□□□□□ -0.62
CAPN1-212ENST00000527887 FAM25AB3EWG3 89 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 FAM25CB3EWG5 89 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 FAM25GB3EWG6 89 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 CCL24O00175 119 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 F2RL1P55085 397 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 KRTAP10-11P60412 298 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 CFHR3Q02985 330 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 HMGN3Q15651 99 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 ZNF79Q15937 498 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 C2orf76Q3KRA6 126 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 NKAPLQ5M9Q1 402 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 MOB1BQ7L9L4 216 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 OR2AK2Q8NG84 335 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 OR52L2PQ8NGH6 319 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 SETD6Q8TBK2 473 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 SULT4A1Q9BR01 284 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 URM1Q9BTM9 101 aaKnown RBP11.14□□□□□ -0.63
CAPN1-212ENST00000527887 RHBDL2Q9NX52 303 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 PIPOXQ9P0Z9 390 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 EXTL2Q9UBQ6 330 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 ZNF107Q9UII5 783 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-212ENST00000527887 RAB22AQ9UL26 194 aa11.14□□□□□ -0.63
CAPN1-212ENST00000527887 TRBV6-6A0A0A6YYG2 114 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 TMEM14DPA8MWL7 114 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 J3QRK9 145 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 ITGB1BP1O14713 200 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 RAMP3O60896 148 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 NAPSAO96009 420 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 RPLP1P05386 114 aaKnown RBP11.13□□□□□ -0.63
CAPN1-212ENST00000527887 EIF4EP06730 217 aaKnown RBP11.13□□□□□ -0.63
CAPN1-212ENST00000527887 PPP1CCP36873 323 aaKnown RBP11.13□□□□□ -0.63
CAPN1-212ENST00000527887 ACTBP60709 375 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 QRFPP83859 136 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 MMDQ15546 238 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 ZNF880Q6PDB4 577 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 ZNF833PQ6ZTB9 187 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 ODF3L1Q8IXM7 274 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 MINDY2Q8NBR6 621 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 OR5H6Q8NGV6 325 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 SLC25A38Q96DW6 304 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 NABP2Q9BQ15 211 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 HSPB9Q9BQS6 159 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 ZNF251Q9BRH9 671 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 FAAP24Q9BTP7 215 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 DIABLOQ9NR28 239 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 PLEKHJ1Q9NW61 149 aa11.13□□□□□ -0.63
CAPN1-212ENST00000527887 METTL21EPA6NDL7 271 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 RAB29O14966 203 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 XRCC3O43542 346 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 GSTZ1O43708 216 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-212ENST00000527887 HLA-DRB1P01911 266 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 HLA-DQB1P01920 261 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 PSMB8P28062 276 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 BLVRBP30043 206 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-212ENST00000527887 GNMTQ14749 295 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 DEFB121Q5J5C9 76 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 OR10K2Q6IF99 312 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 C18orf65Q6ZTR6 163 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 C6orf201Q7Z4U5 140 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 FAM89BQ8N5H3 189 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 NPBQ8NG41 125 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 OR5M8Q8NGP6 311 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 DEDD2Q8WXF8 326 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 RAX2Q96IS3 184 aa11.12□□□□□ -0.63
CAPN1-212ENST00000527887 SDHCQ99643 169 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms