RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 C8orf87E5RJ46 101 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 H3BSA7 217 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 PSMD12O00232 456 aaPredicted RBP1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 UBFD1O14562 309 aaKnown RBP1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 UBDO15205 165 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 ACOX3O15254 700 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 CDK14O94921 469 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 FSTL3O95633 263 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 HTR1AP08908 422 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 SEC11BP0C7V7 166 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 OGNP20774 298 aaKnown RBP1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 GABARAPL2P60520 117 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 PRKCDQ05655 676 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 STX5Q13190 355 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 PMS2P3Q13401 168 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 DMC1Q14565 340 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 IHHQ14623 411 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 POU6F1Q14863 301 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 COX19Q49B96 90 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 KLHL12Q53G59 568 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 IDNKQ5T6J7 187 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 HBMQ6B0K9 141 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 C16orf47Q6ZP98 133 aaPredicted RBP1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 FAM231DQ6ZW35 169 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 SSX6Q7RTT6 188 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 MARCH3Q86UD3 253 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 DHFR2Q86XF0 187 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 CLVS1Q8IUQ0 354 aaPredicted RBP1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 TMEM86AQ8N2M4 240 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 MIR7-3HGQ8N6C7 128 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 ZNF615Q8N8J6 731 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 ACBD4Q8NC06 268 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 ZNF738Q8NE65 137 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 OR7G1Q8NGA0 311 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 KLF14Q8TD94 323 aaPredicted RBP1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 PHF10Q8WUB8 498 aaKnown RBP1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 TWIST2Q8WVJ9 160 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 CANT1Q8WVQ1 401 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 BORCS5Q969J3 196 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 C12orf43Q96C57 262 aaKnown RBP1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 STARD4Q96DR4 205 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 ZMYND19Q96E35 227 aaPredicted RBP1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 IMP4Q96G21 291 aaKnown RBP1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 PPP1R36Q96LQ0 422 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 CCDC115Q96NT0 180 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 PPP1R2P1Q96PQ5 205 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 C9orf16Q9BUW7 83 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 METTL8Q9H825 291 aaKnown RBP1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 POPDC3Q9HBV1 291 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 FAM60AQ9NP50 221 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 INIPQ9NRY2 104 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 CMTM6Q9NX76 183 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 ENOPH1Q9UHY7 261 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 FBXO5Q9UKT4 447 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 SNX10Q9Y5X0 201 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 GOLGA4Q13439 2230 aaKnown RBP1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 KIAA1549Q9HCM3 1950 aa1.89□□□□□ -2.11
HMGN1P28-201ENST00000521340 SHANK1Q9Y566 2161 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 PDE4DIPQ5VU43 2346 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 TMEM213A2RRL7 107 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 A8MWL6 223 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 AZIN1O14977 448 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 PDCD6O75340 191 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 SULT1C4O75897 302 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 MYO1DO94832 1006 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 EPPINO95925 133 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 IGLV3-27P01718 113 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 MAS1P04201 325 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 RBP1P09455 135 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 OR5AC1P0C628 307 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 GIMD1P0DJR0 217 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 SMIM10L2AP0DMW4 78 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 SMIM10L2BP0DMW5 78 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 CGB3P0DN86 165 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 CGB7P0DN87 165 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 IDO1P14902 403 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 NPY1RP25929 384 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 TUFMP49411 452 aaKnown RBP1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 PSMB2P49721 201 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 ZNF140P52738 457 aaPredicted RBP1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 STC1P52823 247 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 TMBIM6P55061 237 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 FOXA1P55317 472 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 MAP3K7CLP57077 242 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 NAA20P61599 178 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 BCL2A1Q16548 175 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 BRMS1LQ5PSV4 323 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 XAF1Q6GPH4 301 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 LAIR2Q6ISS4 152 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 NIPAL1Q6NVV3 410 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 PRSS54Q6PEW0 395 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 SLC25A34Q6PIV7 304 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 ZNF773Q6PK81 442 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 TBPL2Q6SJ96 375 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 LINC00299Q6ZSB3 139 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 RPS27LQ71UM5 84 aaKnown RBP1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 BOD1L2Q8IYS8 172 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 UMODL1-AS1Q8N2C9 162 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 DNAAF3Q8N9W5 541 aa1.88□□□□□ -2.11
HMGN1P28-201ENST00000521340 ZFP62Q8NB50 900 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms