RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 C9orf40Q8IXQ3 194 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 SGMS2Q8NHU3 365 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 TMEM101Q96IK0 257 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 IGHV3OR16-12A0A075B7B8 117 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 A0A1W2PRS3 328 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 ZNF735P0CB33 412 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 MC5RP33032 325 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 ZNF137PP52743 207 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 IRF3Q14653 427 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 C1QL3Q5VWW1 255 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 PRNTQ86SH4 94 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 GVQW1Q8N7I0 195 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 OR10S1Q8NGN2 331 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 MRPL30Q8TCC3 161 aaKnown RBP10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 WDR54Q9H977 334 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 SNURFLB1AK76 121 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 CTSDP07339 412 aaPredicted RBP10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 CCL4P13236 92 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 TM4SF20Q53R12 229 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 FAM222BQ8WU58 562 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 ZNF107Q9UII5 783 aaPredicted RBP10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 PRNDQ9UKY0 176 aa10.55□□□□□ -0.72
ERGIC1-208ENST00000520399 FAM157CP0CG43 387 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 TMEM78Q5T7P6 136 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 ZAR1Q86SH2 424 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 MDP1Q86V88 176 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 SLC52A3Q9NQ40 469 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 TRAV30A0A087WSZ9 112 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 TRAV39A0A0B4J263 110 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 TMEM262E9PQX1 116 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 CA1P00915 261 aaPredicted RBP10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 DYNLT3P51808 116 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 OR4C13Q8NGP0 309 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 OR2H1Q9GZK4 316 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 CYSLTR1Q9Y271 337 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 NUP205Q92621 2012 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 TMSB15BA0A087X1C1 80 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 CXorf1O96002 111 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 ZNF506Q5JVG8 444 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 OR2C3Q8N628 320 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 OR51B2Q9Y5P1 312 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 IGHV2-70P01814 119 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 IGHV4-34P06331 123 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 RFESDQ8TAC1 157 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 WNT2BQ93097 391 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 ZNF665Q9H7R5 613 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 SPCS1Q9Y6A9 102 aa10.54□□□□□ -0.72
ERGIC1-208ENST00000520399 CCL3P10147 92 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 IER3P46695 156 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 TMEM249Q2WGJ8 235 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 GAB4Q2WGN9 574 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 C10orf111Q8N326 155 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 TMEM70Q9BUB7 260 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 GEMIN7Q9H840 131 aaKnown RBP10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 RBMY1BA6NDE4 496 aaKnown RBP10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 RBMY1EA6NEQ0 496 aaKnown RBP10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 C19orf67A6NJJ6 358 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 NPFFO15130 113 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 KBTBD11O94819 623 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 RBMY1DP0C7P1 496 aaKnown RBP10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 RBMY1A1P0DJD3 496 aaKnown RBP10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 RBMY1CP0DJD4 496 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 C3AR1Q16581 482 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 CCDC144NLQ6NUI1 221 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 C16orf92Q96LL3 132 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 GPR35Q9HC97 309 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 IGKV3D-15A0A087WSY6 115 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 IGKV3-15P01624 115 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 LIFP15018 202 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 GFRA1P56159 465 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 MEF2CQ06413 473 aaPredicted RBP10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 LRRC75AQ8NAA5 344 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 TTC3P53804 2025 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 TDGF1P3P51864 188 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 TMEM52Q8NDY8 209 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 ELOVL5Q9NYP7 299 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 CHTOPQ9Y3Y2 248 aaKnown RBP10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 FOXS1O43638 330 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 IL4P05112 153 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 SMIM13P0DJ93 91 aa10.53□□□□□ -0.72
ERGIC1-208ENST00000520399 MYO16Q9Y6X6 1858 aa10.52□□□□□ -0.72
ERGIC1-208ENST00000520399 GGTLC2Q14390 218 aa10.52□□□□□ -0.72
ERGIC1-208ENST00000520399 IGKV3D-11A0A0A0MRZ8 115 aa10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 IGKV3OR2-268A0A0C4DH90 116 aa10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 IGKV3-11P04433 115 aa10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 FAM181AQ8N9Y4 354 aa10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 PHLDA1Q8WV24 401 aaPredicted RBP10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 C3orf80F5H4A9 247 aa10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 CDK2AP2O75956 126 aa10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 SELLP14151 372 aa10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 TPTE2P1Q5T6R2 138 aa10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 CYB561D1Q8N8Q1 229 aa10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 DTX4Q9Y2E6 619 aa10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 A0A087WWC5 75 aa10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 MDKP21741 143 aaPredicted RBP10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 DLX6P56179 175 aa10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 FOXC2Q99958 501 aa10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 NPDC1Q9NQX5 325 aaPredicted RBP10.52□□□□□ -0.73
ERGIC1-208ENST00000520399 TAF1LQ8IZX4 1826 aa10.51□□□□□ -0.73
ERGIC1-208ENST00000520399 ESDP10768 282 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms