RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 BTN2A3PQ96KV6 586 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 OR4K3Q96R72 315 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 RARRES2Q99969 163 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 HSPB9Q9BQS6 159 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 MARVELD1Q9BSK0 173 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 FAAP24Q9BTP7 215 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 RSPO3Q9BXY4 272 aaPredicted RBP2.3□□□□□ -2.04
VPS13B-207ENST00000518569 SLC17A9Q9BYT1 436 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 MAP1LC3BQ9GZQ8 125 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 DEFB127Q9H1M4 99 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 RNF167Q9H6Y7 350 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 LRTM1Q9HBL6 345 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 CCL28Q9NRJ3 127 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 LYRM2Q9NU23 88 aaPredicted RBP2.3□□□□□ -2.04
VPS13B-207ENST00000518569 MED29Q9NX70 200 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 CLCF1Q9UBD9 225 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 SHPKQ9UHJ6 478 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 JPT1Q9UK76 154 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 DNAJC12Q9UKB3 198 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 MMP17Q9ULZ9 603 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 SSR3Q9UNL2 185 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 CARHSP1Q9Y2V2 147 aaKnown RBP2.3□□□□□ -2.04
VPS13B-207ENST00000518569 HEY1Q9Y5J3 304 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 OVOS2A0A0G2JMS6 1433 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 OVOS2A0A0J9YW53 1432 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 NAIPQ13075 1403 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 EEA1Q15075 1411 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 OVOS2Q6IE36 1432 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 RRBP1Q9P2E9 1410 aaKnown RBP2.3□□□□□ -2.04
VPS13B-207ENST00000518569 C5P01031 1676 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 LY75O60449 1722 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 RLFQ13129 1914 aa2.3□□□□□ -2.04
VPS13B-207ENST00000518569 DICER1Q9UPY3 1922 aaKnown RBP2.29□□□□□ -2.04
VPS13B-207ENST00000518569 KIAA1551Q9HCM1 1747 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 USP54Q70EL1 1684 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 LMO7Q8WWI1 1683 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 TRPM1Q7Z4N2 1603 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 BCL9O00512 1426 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 CEP162Q5TB80 1403 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 IBTKQ9P2D0 1353 aaPredicted RBP2.29□□□□□ -2.04
VPS13B-207ENST00000518569 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.29□□□□□ -2.04
VPS13B-207ENST00000518569 A0A087WUJ7 227 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 A0A0X1KG70 313 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 EXOC1LA0A1B0GW35 172 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 OR4C46A6NHA9 309 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 EVPLLA8MZ36 301 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 K7EPK0 472 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 MYL12BO14950 172 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 C6orf47O95873 294 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 CCNE2O96020 404 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 MMP7P09237 267 aaPredicted RBP2.29□□□□□ -2.04
VPS13B-207ENST00000518569 CSF3P09919 207 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 ZNF806P0C7X5 589 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 AGTR1P30556 359 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 PFN2P35080 140 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 HSPA9P38646 679 aaKnown RBP2.29□□□□□ -2.04
VPS13B-207ENST00000518569 GALR1P47211 349 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 DNAJB13P59910 316 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 GTF2BQ00403 316 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 IFITM2Q01629 132 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 SLC25A11Q02978 314 aaKnown RBP2.29□□□□□ -2.04
VPS13B-207ENST00000518569 ZNF92Q03936 586 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 GRK1Q15835 563 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 TAF9Q16594 264 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 C4orf26Q17RF5 130 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 PLPPR5Q32ZL2 321 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 VAX1Q5SQQ9 334 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 FBXW9Q5XUX1 488 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 KCTD16Q68DU8 428 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 AGTRAPQ6RW13 159 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 PLET1Q6UQ28 207 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 ZNF620Q6ZNG0 422 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 TMPPEQ6ZT21 453 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 LINC01551Q86U37 167 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 DOLPP1Q86YN1 238 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 C1orf158Q8N1D5 194 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 TSTD1Q8NFU3 115 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 OR51A2Q8NGJ7 313 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 OR13C4Q8NGS5 318 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 OR10R2Q8NGX6 335 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 OR4S2Q8NH73 311 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 OR1S1Q8NH92 325 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 ZNRF2Q8NHG8 242 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 SPPL2BQ8TCT7 592 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 SLC37A2Q8TED4 501 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 CANT1Q8WVQ1 401 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 MBD3L1Q8WWY6 194 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 GHSRQ92847 366 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 FGF14Q92915 247 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 PPCDCQ96CD2 204 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 SLC35G5Q96KT7 338 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 DNAJC30Q96LL9 226 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 FOPNLQ96NB1 174 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 COL21A1Q96P44 957 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 RNF157Q96PX1 679 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 P2RX4Q99571 388 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 TBX5Q99593 518 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 EFCAB11Q9BUY7 163 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 MROQ9BYG7 248 aa2.29□□□□□ -2.04
VPS13B-207ENST00000518569 VSIRQ9H7M9 311 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms