RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 OR10D3Q8NH80 312 aa6.24□□□□□ -1.41
CLIP1-205ENST00000514271 GFOD1Q9NXC2 390 aa6.24□□□□□ -1.41
CLIP1-205ENST00000514271 AK3Q9UIJ7 227 aa6.24□□□□□ -1.41
CLIP1-205ENST00000514271 ACACBO00763 2458 aa6.24□□□□□ -1.41
CLIP1-205ENST00000514271 OR6C6A6NF89 314 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 NPIPA3F8WFD2 350 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 K7EP13 123 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 OR4A8P0C604 315 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 CD99P14209 185 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 NRN1LQ496H8 165 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 ADAM5Q6NVV9 412 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 CLEC9AQ6UXN8 241 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 S100A7AQ86SG5 101 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 C17orf78Q8N4C9 275 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 SLC35G3Q8N808 338 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 GATSQ8NAP1 163 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 OR10A7Q8NGE5 316 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 OXGR1Q96P68 337 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 CABLES2Q9BTV7 478 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 TMEM59Q9BXS4 323 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 VDAC3Q9Y277 283 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 TIMM9Q9Y5J7 89 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 MAP1BP46821 2468 aaKnown RBP6.23□□□□□ -1.41
CLIP1-205ENST00000514271 USP24Q9UPU5 2620 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 SAA2-SAA4A0A096LPE2 208 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 A0A0G2JRQ6 117 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 SYNGR3O43761 229 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 NDUFB8O95169 186 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 TSPAN15O95858 294 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 TOMM40O96008 361 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 CCL2P13500 99 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 CDKN1AP38936 164 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 MDH2P40926 338 aaKnown RBP6.23□□□□□ -1.41
CLIP1-205ENST00000514271 DAP3P51398 398 aaKnown RBP6.23□□□□□ -1.41
CLIP1-205ENST00000514271 PTTG1IPP53801 180 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 CLDN15P56746 228 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 HLA-DRB3P79483 266 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 P2RY6Q15077 328 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 ALKBH6Q3KRA9 238 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 MORN2Q502X0 79 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 PRR30Q53SZ7 412 aaPredicted RBP6.23□□□□□ -1.41
CLIP1-205ENST00000514271 FAM214BQ7L5A3 538 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 OR51E1Q8TCB6 317 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 CASTOR1Q8WTX7 329 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 C22orf15Q8WYQ4 148 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 C1orf159Q96HA4 380 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 NAGKQ9UJ70 344 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 PROCRQ9UNN8 238 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 FBXO7Q9Y3I1 522 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 DHRS3O75911 302 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 METTL15P1P0C7V9 234 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 ERVFC1-1P60608 527 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 GNB2P62879 340 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 ARL16Q0P5N6 197 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 ODF4Q2M2E3 257 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 OR51T1Q8NGJ9 327 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 OR5D13Q8NGL4 314 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 OR5H2Q8NGV7 314 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 PP6455Q8WZ26 134 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 RNASE6Q93091 150 aaKnown RBP6.23□□□□□ -1.41
CLIP1-205ENST00000514271 APOBEC3DQ96AK3 386 aaPredicted RBP6.23□□□□□ -1.41
CLIP1-205ENST00000514271 TRIB1Q96RU8 372 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 OR11A1Q9GZK7 315 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 RGCCQ9H4X1 137 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 KCNJ16Q9NPI9 418 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 FAM215AQ9Y5M1 114 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 PXMP4Q9Y6I8 212 aa6.23□□□□□ -1.41
CLIP1-205ENST00000514271 AKAP13Q12802 2813 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 A0A0J9YW62 118 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 NUPR1O60356 82 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 DUSP1P28562 367 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 SGPP2Q8IWX5 399 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 ZIC4Q8N9L1 334 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 MAFIPQ8WZ33 124 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 HDHD3Q9BSH5 251 aaPredicted RBP6.22□□□□□ -1.41
CLIP1-205ENST00000514271 PBDC1Q9BVG4 233 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 RNF114Q9Y508 228 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 C13orf42A0A1B0GVH6 325 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 DLEU1O43261 78 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 LILRA1O75019 489 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 AGFG2O95081 481 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 BCL2P10415 239 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 OR3A2P47893 321 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 MYBPHQ13203 477 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 C20orf24Q9BUV8 137 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 TET2Q6N021 2002 aaPredicted RBP6.22□□□□□ -1.41
CLIP1-205ENST00000514271 OR6A2O95222 327 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 BRI3O95415 125 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 PGA5P0DJD9 388 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 BRS3P32247 399 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 BRWD1-AS2P59051 145 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 LRRC75BQ2VPJ9 315 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 ZNF774Q6NX45 483 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 C20orf196Q8IYI0 205 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 ZNF525Q8N782 197 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 NHLRC2Q8NBF2 726 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 FAM222BQ8WU58 562 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 BCL2L2Q92843 193 aaPredicted RBP6.22□□□□□ -1.41
CLIP1-205ENST00000514271 FAM210BQ96KR6 192 aa6.22□□□□□ -1.41
CLIP1-205ENST00000514271 ATP5SQ99766 215 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms