RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 TMEM204Q9BSN7 226 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 SMIM3Q9BZL3 60 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 ARV1Q9H2C2 271 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 GFOD1Q9NXC2 390 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 COA4Q9NYJ1 87 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 MMP24Q9Y5R2 645 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 IGSF23A1L1A6 192 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 LINC00473A8K010 186 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 C17orf98A8MV24 154 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 WRBO00258 174 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 TNFRSF13BO14836 293 aaPredicted RBP12.36□□□□□ -0.43
VCAN-211ENST00000513984 CLDN14O95500 239 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 TMEM50AO95807 157 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 P0C879 139 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 VAMP2P63027 116 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 NHLH2Q02577 135 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 IZUMO4Q1ZYL8 232 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 EIF5AL1Q6IS14 154 aaKnown RBP12.36□□□□□ -0.43
VCAN-211ENST00000513984 CLEC9AQ6UXN8 241 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 HSD17B13Q7Z5P4 300 aaPredicted RBP12.36□□□□□ -0.43
VCAN-211ENST00000513984 SPAG16Q8N0X2 631 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 EIF4E3Q8N5X7 224 aaKnown RBP12.36□□□□□ -0.43
VCAN-211ENST00000513984 RNF141Q8WVD5 230 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 CCL17Q92583 94 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 SLC25A31Q9H0C2 315 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 IFI27L2Q9H2X8 130 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 GAB2Q9UQC2 676 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 NBEAQ8NFP9 2946 aa12.36□□□□□ -0.43
VCAN-211ENST00000513984 FAM24AA6NFZ4 105 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 I3L521 148 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 CHST1O43916 411 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 PROP1O75360 226 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 ATG12O94817 140 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 FAM157CP0CG43 387 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 DUTP33316 252 aaKnown RBP12.35□□□□□ -0.43
VCAN-211ENST00000513984 RAB7AP51149 207 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 CAV2P51636 162 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 ZNF134P52741 427 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 MUC15Q8N387 334 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 TMEM252Q8N6L7 170 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 RAB40CQ96S21 281 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 WFDC1Q9HC57 220 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 SLC25A10Q9UBX3 287 aaPredicted RBP12.35□□□□□ -0.43
VCAN-211ENST00000513984 LAMP3Q9UQV4 416 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 LINC00312Q9Y6C7 94 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 KALRNO60229 2985 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 DOCK11Q5JSL3 2073 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 ITPR1Q14643 2758 aa12.35□□□□□ -0.43
VCAN-211ENST00000513984 BORCS7-ASMTA0A0B4J1R7 106 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 hADV38S2A0JD32 116 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 S1PR2O95136 353 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 NXPH3O95157 252 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 FGF2P09038 288 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 PAX9P55771 341 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 MEF2CQ06413 473 aaPredicted RBP12.34□□□□□ -0.43
VCAN-211ENST00000513984 ZNF816Q0VGE8 651 aaPredicted RBP12.34□□□□□ -0.43
VCAN-211ENST00000513984 OR2B11Q5JQS5 317 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 ODF3L1Q8IXM7 274 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 ZNF295-AS1Q8N0V1 137 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 ABHD14AQ9BUJ0 271 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 TAS2R3Q9NYW6 316 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 IDI2-AS1Q9NZ38 188 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 ABCA4P78363 2273 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 IGHV1-69-2A0A0G2JMI3 117 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 MED19A0JLT2 244 aaPredicted RBP12.34□□□□□ -0.43
VCAN-211ENST00000513984 FAM90A26D6RGX4 464 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 FCN3O75636 299 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 BAXQ07812 192 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.34□□□□□ -0.43
VCAN-211ENST00000513984 ZNF439Q8NDP4 499 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 CD300LFQ8TDQ1 290 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 KAAG1Q9UBP8 84 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 PKD1L2Q7Z442 2459 aa12.34□□□□□ -0.43
VCAN-211ENST00000513984 TPRP12270 2363 aaKnown RBP12.33□□□□□ -0.44
VCAN-211ENST00000513984 A8MXK9 166 aa12.33□□□□□ -0.44
VCAN-211ENST00000513984 TOR1AO14656 332 aa12.33□□□□□ -0.44
VCAN-211ENST00000513984 SLC31A2O15432 143 aa12.33□□□□□ -0.44
VCAN-211ENST00000513984 SYNGR2O43760 224 aa12.33□□□□□ -0.44
VCAN-211ENST00000513984 NDUFB7P17568 137 aa12.33□□□□□ -0.44
VCAN-211ENST00000513984 G6PCP35575 357 aa12.33□□□□□ -0.44
VCAN-211ENST00000513984 UTF1Q5T230 341 aa12.33□□□□□ -0.44
VCAN-211ENST00000513984 GINS3Q9BRX5 216 aa12.33□□□□□ -0.44
VCAN-211ENST00000513984 LPAR3Q9UBY5 353 aa12.33□□□□□ -0.44
VCAN-211ENST00000513984 WSB1Q9Y6I7 421 aa12.33□□□□□ -0.44
VCAN-211ENST00000513984 SESN1Q9Y6P5 492 aa12.33□□□□□ -0.44
VCAN-211ENST00000513984 RELNP78509 3460 aa12.33□□□□□ -0.44
VCAN-211ENST00000513984 SULT1A2P50226 295 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 MIDNQ504T8 468 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 CT45A1Q5HYN5 189 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 NCR3LG1Q68D85 454 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 OR10A7Q8NGE5 316 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 CT45A3Q8NHU0 189 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 SAT2Q96F10 170 aaPredicted RBP12.32□□□□□ -0.44
VCAN-211ENST00000513984 C19orf12Q9NSK7 152 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 RPUSD1Q9UJJ7 312 aaKnown RBP12.32□□□□□ -0.44
VCAN-211ENST00000513984 SMG1Q96Q15 3661 aaKnown RBP12.32□□□□□ -0.44
VCAN-211ENST00000513984 B8ZZF3 427 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 TEX46H3BTG2 121 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 M0R1X1 148 aa12.32□□□□□ -0.44
VCAN-211ENST00000513984 RAB29O14966 203 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms