RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 IGLV2-14P01704 120 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 FCER2P06734 321 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 IGKV1-13P0DP09 117 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 KIR2DS4P43632 304 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 SERPINB10P48595 397 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 SSBP2P81877 361 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 FOXL1Q12952 345 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 TMEM30BQ3MIR4 351 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 IDNKQ5T6J7 187 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 GPR107Q5VW38 600 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 TRAT1Q6PIZ9 186 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 GLDNQ6ZMI3 551 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 Q6ZS49 121 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 ANKRD13BQ86YJ7 626 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 OR8H3Q8N146 312 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 LYG1Q8N1E2 194 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 OR2C3Q8N628 320 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 GVQW1Q8N7I0 195 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 C11orf44Q8N8P7 122 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 Q8N9W7 124 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 OR10X1Q8NGY0 326 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 OR4F5Q8NH21 305 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 IL1F10Q8WWZ1 152 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 SLC25A46Q96AG3 418 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 CREB3L1Q96BA8 519 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 RBM14Q96PK6 669 aaKnown RBP5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 YPEL2Q96QA6 119 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 HSPB9Q9BQS6 159 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 WDR12Q9GZL7 423 aaKnown RBP5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 C11orf54Q9H0W9 315 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 ATG5Q9H1Y0 275 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 MIXL1Q9H2W2 232 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 CHMP1AQ9HD42 196 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 OR2S2Q9NQN1 319 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 SLC23A1Q9UHI7 598 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 ETV7Q9Y603 341 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 NOTCH1P46531 2555 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 TRBV6-7A0A0A0MS04 114 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 BTBD17A6NE02 478 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 OOSP1A8MZH6 123 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 TRDCB7Z8K6 153 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 H0YJW9 148 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 TOR1AO14656 332 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 SPINT2O43291 252 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 CT45A6P0DMU7 189 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 CT45A5P0DMU8 189 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 CT45A7P0DMV0 189 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 CD28P10747 220 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 RAB7AP51149 207 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 PSMD7P51665 324 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 F2RL1P55085 397 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 TAS2R20P59543 309 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 EIF4EBP1Q13541 118 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 HNF4GQ14541 408 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 MRGPRG-AS1Q2M3A8 158 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 CDNFQ49AH0 187 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 ABCA11PQ4W5N1 156 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 HACD4Q5VWC8 232 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 C11orf88Q6PI97 169 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 TEPPQ6URK8 271 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 FAM131AQ6UXB0 335 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 H1FOOQ8IZA3 346 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 FAM71E2Q8N5Q1 922 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 ZNF383Q8NA42 475 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 OR4C13Q8NGP0 309 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 CAPSLQ8WWF8 208 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 AUNIPQ9H7T9 357 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 ABCB10Q9NRK6 738 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 RDH8Q9NYR8 311 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 ZNF107Q9UII5 783 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 MOB4Q9Y3A3 225 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 FBXO7Q9Y3I1 522 aa5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 AMMECR1Q9Y4X0 333 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-207ENST00000509162 MEIS3P1A6NDR6 274 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 SERPINE3A8MV23 424 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 ITGB1BP1O14713 200 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 TMEM11P17152 192 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 DTYMKP23919 212 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 PRRX1P54821 245 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 CFHR3Q02985 330 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 C19orf54Q5BKX5 351 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 PRR31Q5SQ13 230 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 C18orf65Q6ZTR6 163 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 MOB3BQ86TA1 216 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 TGIF2LXQ8IUE1 241 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 C3orf56Q8N813 242 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 DRAXINQ8NBI3 349 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 OR4A4PQ8NGN8 299 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 DDB2Q92466 427 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 GALMQ96C23 342 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 NOL4LQ96MY1 436 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 GPHA2Q96T91 129 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 NPFFR1Q9GZQ6 430 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 FXYD6Q9H0Q3 95 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 ABCG5Q9H222 651 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 DCSTAMPQ9H295 470 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 BEX1Q9HBH7 125 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 LINC00527Q9UJ94 153 aa5.68□□□□□ -1.5
TOPBP1-207ENST00000509162 CEPT1Q9Y6K0 416 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms