RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 TNFSF8P32971 234 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 ETV6P41212 452 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 PRRX1P54821 245 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 ACTBP60709 375 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 ACTG1P63261 375 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 HLA-DRB3P79483 266 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF45Q02386 682 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 C17orf58Q2M2W7 97 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 MIDNQ504T8 468 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 SPANXN2Q5MJ10 180 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 CNIH2Q6PI25 160 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 C9orf139Q6ZV77 190 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 TCF23Q7RTU1 214 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 VMO1Q7Z5L0 202 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 HOGA1Q86XE5 327 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 FGFRL1Q8N441 504 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 LINC00311Q8N616 119 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 Q8N7P7 452 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 TPRX1Q8N7U7 411 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR11H6Q8NGC7 330 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR13A1Q8NGR1 328 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR4K15Q8NH41 348 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR9G1Q8NH87 305 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF596Q8TC21 504 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 MRGPRDQ8TDS7 321 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 GPX8Q8TED1 209 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 DEDD2Q8WXF8 326 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 DYRK2Q92630 601 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 YPEL2Q96QA6 119 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 SOSTQ9BQB4 213 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 PCGF1Q9BSM1 259 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 TMEM133Q9H2Q1 129 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 TAF9BQ9HBM6 251 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 TAS2R8Q9NYW2 309 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 IDI2-AS1Q9NZ38 188 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 PTTG2Q9NZH5 202 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF581Q9P0T4 197 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 JPT1Q9UK76 154 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 NUP50Q9UKX7 468 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 TBL2Q9Y4P3 447 aaKnown RBP4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 MXRA5Q9NR99 2828 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 FN1P02751 2386 aaKnown RBP4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 NIPBLQ6KC79 2804 aaeCLIP4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 IGHV1-69DA0A0B4J2H0 117 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 CENPVL3A0A0U1RRI6 287 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 FABP12A6NFH5 140 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 SH2D7A6NKC9 451 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 OOSP1A8MZH6 123 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 C12orf77C9JDV5 145 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 FABP7O15540 132 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 GSTZ1O43708 216 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 RBBP9O75884 186 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 IGHV1-69P01742 117 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 GSTT2BP0CG30 244 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 CCL3L1P16619 93 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 RCC1P18754 421 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 TBPP20226 339 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZBTB25P24278 435 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 RCVRNP35243 200 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 CEACAM3P40198 252 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 RAB7AP51149 207 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 TAS2R46P59540 309 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 IL18Q14116 193 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 CNPY1Q3B7I2 92 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 CHRFAM7AQ494W8 412 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 ACTBL2Q562R1 376 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 FAM120AOSQ5T036 256 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 MINOS1Q5TGZ0 78 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF626Q68DY1 528 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 CCDC190Q86UF4 302 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 LAX1Q8IWV1 398 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 BEST4Q8NFU0 473 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR6Q1Q8NGQ2 317 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 SETD6Q8TBK2 473 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 CCDC107Q8WV48 283 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 FCAMRQ8WWV6 532 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 S100ZQ8WXG8 99 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 TBX15Q96SF7 602 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 CABLES2Q9BTV7 478 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 CLEC7AQ9BXN2 247 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 BEX2Q9BXY8 128 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 MIXL1Q9H2W2 232 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 IFT46Q9NQC8 304 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR2S2Q9NQN1 319 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 GNG12Q9UBI6 72 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 ANXA10Q9UJ72 324 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 ANAPC10Q9UM13 185 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 MRPS7Q9Y2R9 242 aaKnown RBP4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 AMMECR1Q9Y4X0 333 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 MINOS1-NBL1R4GNA1 71 aa4.45□□□□□ -1.7
HMGB1P44-201ENST00000508597 JMJD1CQ15652 2540 aa4.44□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZFHX3Q15911 3703 aa4.44□□□□□ -1.7
HMGB1P44-201ENST00000508597 SETD2Q9BYW2 2564 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P44-201ENST00000508597 TRBV6-7A0A0A0MS04 114 aa4.44□□□□□ -1.7
HMGB1P44-201ENST00000508597 IGHV2-26A0A0B4J1V2 119 aa4.44□□□□□ -1.7
HMGB1P44-201ENST00000508597 DNAJC9-AS1A6NH13 148 aa4.44□□□□□ -1.7
HMGB1P44-201ENST00000508597 VGLL3A8MV65 326 aa4.44□□□□□ -1.7
HMGB1P44-201ENST00000508597 ODF3BA8MYP8 253 aa4.44□□□□□ -1.7
HMGB1P44-201ENST00000508597 LEUTXA8MZ59 168 aa4.44□□□□□ -1.7
HMGB1P44-201ENST00000508597 RNASEK-C17orf49H0YIS7 233 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms