RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 FNDC10F2Z333 226 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 H3BPC8 53 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 SLC17A3O00476 420 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 ITGB1BP1O14713 200 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 BIRC5O15392 142 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 CD36P16671 472 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 CXCL2P19875 107 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 CXCL3P19876 107 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 BTN3A2P78410 334 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 SS18Q15532 418 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 TMEM31Q5JXX7 168 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 AMTNQ6UX39 209 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 OR2D3Q8NGH3 330 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 ASB13Q8WXK3 278 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 TMBIM1Q969X1 311 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 SMIM19Q96E16 107 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 TXNDC17Q9BRA2 123 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 HDHD2Q9H0R4 259 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 MYO5BQ9ULV0 1848 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 TRPM3Q9HCF6 1732 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 MUC21A0A0G2JKD1 596 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 MUC21A0A140T8X8 626 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 TEX50A0A1B0GTY4 177 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 TINCRA0A1B0GVN0 87 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 GOLGA8KD6RF30 607 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 GOLGA8MH3BSY2 632 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 GZMBP10144 247 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 UGT2B7P16662 529 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 CRYBB3P26998 211 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 IFNGR2P38484 337 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 RPL14P50914 215 aaKnown RBP1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 ZNF140P52738 457 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 DEFB103AP81534 67 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 EBPQ15125 230 aaKnown RBP1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 LGALS9CQ6DKI2 356 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 BAP18Q8IXM2 172 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 PACRGQ96M98 296 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 KLF6Q99612 283 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 TTTY12Q9BZ98 90 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 NKX6-2Q9C056 277 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 CXCL16Q9H2A7 254 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 EMC3Q9P0I2 261 aa1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 YLPM1P49750 1951 aaKnown RBP1.64□□□□□ -2.15
HMGB1P28-201ENST00000507778 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 TMEM235A6NFC5 223 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 OR11H12B2RN74 326 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 F5H768 121 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 J3QKU1 62 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 M0R381 172 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 OVOL1O14753 267 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 UBE2L6O14933 153 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 COCHO43405 550 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 IL6P05231 212 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 TPM3P06753 285 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 CCL3P10147 92 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 IFI30P13284 250 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 SERPINB10P48595 397 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 SNAP25P60880 206 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 TPM4P67936 248 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 FABP5Q01469 135 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 MGAT3Q09327 533 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 MED21Q13503 144 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 GNA13Q14344 377 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 C2orf91Q6ZV80 131 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 TMEM251Q8N6I4 163 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 OR11H2Q8NH07 326 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 RNASE11Q8TAA1 199 aaKnown RBP1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 MS4A6EQ96DS6 147 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 CPNE2Q96FN4 548 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 MIEN1Q9BRT3 115 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 SLC2A9Q9NRM0 540 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 PLEKHJ1Q9NW61 149 aa1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 PCYT1BQ9Y5K3 369 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P28-201ENST00000507778 ADGRB3O60242 1522 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 LTBP2Q14767 1821 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 A0A0A6YYH2 397 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 C5orf49A4QMS7 147 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 A6NJ64 397 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 PCNX2A6NKB5 2137 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 S1PR2O95136 353 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 MT-CO2P00403 227 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 IGKV1-16P04430 117 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 CDK9P50750 372 aaKnown RBP1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 TMEM33P57088 247 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 GLT6D1Q7Z4J2 308 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 C1orf174Q8IYL3 243 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 LRRC34Q8IZ02 419 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 CMTM5Q96DZ9 223 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 MRPS24Q96EL2 167 aaKnown RBP1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 KCTD7Q96MP8 289 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 ZNF471Q9BX82 626 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 PECRQ9BY49 303 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 PLCH2O75038 1416 aa1.62□□□□□ -2.15
HMGB1P28-201ENST00000507778 IGHV3-15A0A0B4J1V0 119 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 C11orf86A6NJI1 115 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 OR5K4A6NMS3 321 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 H3BRN7 92 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 IGHV1-69P01742 117 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms