RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 KCNJ3P48549 501 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 PTTG1IPP53801 180 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 CXCR4P61073 352 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 TMEM267Q0VDI3 215 aaPredicted RBP5.15□□□□□ -1.59
VCAN-206ENST00000505615 GUCA2BQ16661 112 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 RPEL1Q2QD12 228 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 CTRB2Q6GPI1 263 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 ZNF343Q6P1L6 599 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 GLDNQ6ZMI3 551 aaPredicted RBP5.15□□□□□ -1.59
VCAN-206ENST00000505615 SSX6Q7RTT6 188 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 ODF3L1Q8IXM7 274 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 TMEM217Q8N7C4 229 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 CCDC54Q8NEL0 328 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 TSPAN14Q8NG11 270 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 C2CD4CQ8TF44 421 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 TSEN15Q8WW01 171 aaKnown RBP5.15□□□□□ -1.59
VCAN-206ENST00000505615 SPSB1Q96BD6 273 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 BARHL1Q9BZE3 327 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 PARP12Q9H0J9 701 aaKnown RBP5.15□□□□□ -1.59
VCAN-206ENST00000505615 SPAG4Q9NPE6 437 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 FAM118AQ9NWS6 357 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 PEMTQ9UBM1 199 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 RNF150Q9ULK6 438 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 DHDHQ9UQ10 334 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 H3BN98 237 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 H3BUA1 57 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 BMPR1BO00238 502 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 NDUFAB1O14561 156 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 AIREO43918 545 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 RPP14O95059 124 aaKnown RBP5.14□□□□□ -1.59
VCAN-206ENST00000505615 MT-ND2P03891 347 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 COX4I1P13073 169 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 GZMHP20718 246 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 ETV1P50549 477 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 PSME3P61289 254 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 SSBP2P81877 361 aaPredicted RBP5.14□□□□□ -1.59
VCAN-206ENST00000505615 CDK5Q00535 292 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 IL13RA2Q14627 380 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 GINS1Q14691 196 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 RBMS2Q15434 407 aaKnown RBP5.14□□□□□ -1.59
VCAN-206ENST00000505615 MICAQ29983 383 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 ZIK1Q3SY52 487 aaPredicted RBP5.14□□□□□ -1.59
VCAN-206ENST00000505615 ELP2Q6IA86 826 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 CGB2Q6NT52 195 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 ZNF529Q6P280 563 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 SLC16A13Q7RTY0 426 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 PRSS35Q8N3Z0 413 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 OR10V1Q8NGI7 309 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 OR10AC1Q8NH08 325 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 DYNLRB2Q8TF09 96 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 DYDC1Q8WWB3 177 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 C5orf30Q96GV9 206 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 FAM210AQ96ND0 272 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 CNN2Q99439 309 aaKnown RBP5.14□□□□□ -1.59
VCAN-206ENST00000505615 SCRT2Q9NQ03 307 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 PEF1Q9UBV8 284 aaKnown RBP5.14□□□□□ -1.59
VCAN-206ENST00000505615 HSPB7Q9UBY9 170 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 STRAPQ9Y3F4 350 aaKnown RBP5.14□□□□□ -1.59
VCAN-206ENST00000505615 FAT1Q14517 4588 aa5.14□□□□□ -1.59
VCAN-206ENST00000505615 VPS13BQ7Z7G8 4022 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 A0A0G2JLM5 398 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 TMEM30CPA0ZSE6 113 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 C2orf70A6NJV1 201 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 ARPC2O15144 300 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 ORC5O43913 435 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 HMGN1P05114 100 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 TATDN3Q17R31 274 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 PIGYQ3MUY2 71 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 FAM131AQ6UXB0 335 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 SLC35F2Q8IXU6 374 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 TMEM61Q8N0U2 210 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 SUMF2Q8NBJ7 301 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 OR10G2Q8NGC3 310 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 NSMCE2Q96MF7 247 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 DPCDQ9BVM2 203 aaPredicted RBP5.13□□□□□ -1.59
VCAN-206ENST00000505615 C11orf68Q9H3H3 251 aaKnown RBP5.13□□□□□ -1.59
VCAN-206ENST00000505615 ADGRL4Q9HBW9 690 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 NEK6Q9HC98 313 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 ARL8BQ9NVJ2 186 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 CHTOPQ9Y3Y2 248 aaKnown RBP5.13□□□□□ -1.59
VCAN-206ENST00000505615 SELENOKQ9Y6D0 94 aa5.13□□□□□ -1.59
VCAN-206ENST00000505615 IGLL5B9A064 214 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 M0R2N4 97 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 CA2P00918 260 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 IFNA4P05014 189 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 UBCP0CG48 685 aaKnown RBP5.12□□□□□ -1.59
VCAN-206ENST00000505615 DBTP11182 482 aaKnown RBP5.12□□□□□ -1.59
VCAN-206ENST00000505615 HSD17B1P14061 328 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 FOLR2P14207 255 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 CD40LGP29965 261 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 OR3A3P47888 321 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 MFAP2P55001 183 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 APOC4P55056 127 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 ACTR3P61158 418 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 ALKBH1Q13686 389 aaKnown RBP5.12□□□□□ -1.59
VCAN-206ENST00000505615 GNMTQ14749 295 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 ZSCAN26Q16670 478 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 ZNF562Q6V9R5 426 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 ZNF497Q6ZNH5 498 aa5.12□□□□□ -1.59
VCAN-206ENST00000505615 ZNF833PQ6ZTB9 187 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms