RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 NUFIP2Q7Z417 695 aaKnown RBP10□□□□□ -0.81
UBE3D-206ENST00000505226 OR10G9Q8NGN4 311 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 OR10G7Q8NGN6 311 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 TMEM170AQ8WVE7 144 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 RAB24Q969Q5 203 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 C2orf88Q9BSF0 95 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 A0A1B0GUS0 222 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 PAGE4O60829 102 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 MT-CO3P00414 261 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 HRASP01112 189 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 P0C879 139 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 BMP5P22003 454 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 CEBPDP49716 269 aaPredicted RBP10□□□□□ -0.81
UBE3D-206ENST00000505226 SPINK9Q5DT21 86 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 ACTL10Q5JWF8 245 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 TIPARPQ7Z3E1 657 aaKnown RBP10□□□□□ -0.81
UBE3D-206ENST00000505226 TGIF2LYQ8IUE0 185 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 OR5T1Q8NG75 326 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 LIN7CQ9NUP9 197 aaKnown RBP10□□□□□ -0.81
UBE3D-206ENST00000505226 HSPB7Q9UBY9 170 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 TMEM250H0YL14 139 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 GYPAP02724 150 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 CFIP05156 583 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 PSMB3P49720 205 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 FAM3BP58499 235 aaPredicted RBP9.99□□□□□ -0.81
UBE3D-206ENST00000505226 TIMM9Q9Y5J7 89 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 ZFHX4Q86UP3 3567 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 NEURL1O76050 574 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 ZNF816Q0VGE8 651 aaPredicted RBP9.99□□□□□ -0.81
UBE3D-206ENST00000505226 HLA-CQ95604 372 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 WDYHV1Q96HA8 205 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 ZNF703Q9H7S9 590 aaPredicted RBP9.99□□□□□ -0.81
UBE3D-206ENST00000505226 MPC1Q9Y5U8 109 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 CTXND1A0A1B0GTU2 59 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 OR5B21A6NL26 309 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 FAM166BA8MTA8 275 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 B4E171 279 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 EREGO14944 169 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 ZG16O60844 167 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 TSPAN7P41732 249 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 ALKBH6Q3KRA9 238 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 Q3ZCU0 254 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 FFAR4Q5NUL3 377 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 TGIF2LXQ8IUE1 241 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 Q8N7P7 452 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 SCCPDHQ8NBX0 429 aa9.99□□□□□ -0.81
UBE3D-206ENST00000505226 MBNL3Q9NUK0 354 aaKnown RBP9.99□□□□□ -0.81
UBE3D-206ENST00000505226 AHCTF1Q8WYP5 2266 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 ODAMA1E959 279 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 GGCTO75223 188 aaKnown RBP9.98□□□□□ -0.81
UBE3D-206ENST00000505226 TFF1P04155 84 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 COL8A2P25067 703 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 CHRNA7P36544 502 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 MAGEA5P43359 124 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 ERVK11-1P61568 191 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 GCSAMLQ5JQS6 135 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 PMS2CLQ68D20 193 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 ZNF808Q8N4W9 903 aaPredicted RBP9.98□□□□□ -0.81
UBE3D-206ENST00000505226 OR5B12Q96R08 314 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 NDUFAF3Q9BU61 184 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 PKIBQ9C010 78 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 OR6C3Q9NZP0 311 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 J3QT63 122 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 NUPR1O60356 82 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 PSPNO60542 156 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 S1PR2O95136 353 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 IDH3GP51553 393 aaPredicted RBP9.98□□□□□ -0.81
UBE3D-206ENST00000505226 EIF4EBP1Q13541 118 aaPredicted RBP9.98□□□□□ -0.81
UBE3D-206ENST00000505226 OR2M7Q8NG81 312 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 OR2T10Q8NGZ9 312 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 DERL1Q9BUN8 251 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 GP6Q9HCN6 339 aa9.98□□□□□ -0.81
UBE3D-206ENST00000505226 LRP5LA4QPB2 252 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 LRRC30A6NM36 301 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 C17orf98A8MV24 154 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 CDIPTO14735 213 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 TNRC18O15417 2968 aaPredicted RBP9.97□□□□□ -0.81
UBE3D-206ENST00000505226 CRYAAP02489 173 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 APH1AQ96BI3 265 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 NPCDR1Q9BY65 106 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 PGPEP1LA6NFU8 196 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 FAM90A26D6RGX4 464 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 HOXA6P31267 233 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 ARR3P36575 388 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 BTNL3Q6UXE8 466 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 ZNF114Q8NC26 417 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 OR52L2PQ8NGH6 319 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 MAFAQ8NHW3 353 aaPredicted RBP9.97□□□□□ -0.81
UBE3D-206ENST00000505226 CT55Q8WUE5 264 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 ACY3Q96HD9 319 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 DDA1Q9BW61 102 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 WIPI2Q9Y4P8 454 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 KMT2EQ8IZD2 1858 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 CELA3BP08861 270 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 NOL4LQ96MY1 436 aaPredicted RBP9.97□□□□□ -0.81
UBE3D-206ENST00000505226 ATG101Q9BSB4 218 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 TMEM147Q9BVK8 224 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 OR2D2Q9H210 308 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 C12orf49Q9H741 205 aa9.97□□□□□ -0.81
UBE3D-206ENST00000505226 TP53TG5Q9Y2B4 290 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms