RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 PLCE1Q9P212 2302 aa18.7■□□□□ 0.58
PCDH1-204ENST00000503492 DSCAMO60469 2012 aa18.7■□□□□ 0.58
PCDH1-204ENST00000503492 SELLP14151 372 aa18.7■□□□□ 0.58
PCDH1-204ENST00000503492 TMEM108Q6UXF1 575 aa18.7■□□□□ 0.58
PCDH1-204ENST00000503492 WFDC8Q8IUA0 241 aa18.7■□□□□ 0.58
PCDH1-204ENST00000503492 FAM222BQ8WU58 562 aa18.7■□□□□ 0.58
PCDH1-204ENST00000503492 PLPPR2Q96GM1 343 aa18.7■□□□□ 0.58
PCDH1-204ENST00000503492 RNF7Q9UBF6 113 aa18.7■□□□□ 0.58
PCDH1-204ENST00000503492 EDDM3BP56851 147 aa18.69■□□□□ 0.58
PCDH1-204ENST00000503492 ARL16Q0P5N6 197 aa18.69■□□□□ 0.58
PCDH1-204ENST00000503492 MORN2Q502X0 79 aa18.69■□□□□ 0.58
PCDH1-204ENST00000503492 ZNF66Q6ZN08 573 aa18.69■□□□□ 0.58
PCDH1-204ENST00000503492 GNPNAT1Q96EK6 184 aaPredicted RBP18.69■□□□□ 0.58
PCDH1-204ENST00000503492 ATMQ13315 3056 aa18.69■□□□□ 0.58
PCDH1-204ENST00000503492 UMAD1C9J7I0 102 aa18.69■□□□□ 0.58
PCDH1-204ENST00000503492 DFFBO76075 338 aa18.69■□□□□ 0.58
PCDH1-204ENST00000503492 METTL15P1P0C7V9 234 aa18.69■□□□□ 0.58
PCDH1-204ENST00000503492 GUK1Q16774 197 aa18.69■□□□□ 0.58
PCDH1-204ENST00000503492 HAPLN4Q86UW8 402 aa18.69■□□□□ 0.58
PCDH1-204ENST00000503492 JKAMPQ9P055 326 aa18.69■□□□□ 0.58
PCDH1-204ENST00000503492 GNG12Q9UBI6 72 aa18.69■□□□□ 0.58
PCDH1-204ENST00000503492 FAM90A26D6RGX4 464 aa18.68■□□□□ 0.58
PCDH1-204ENST00000503492 NPBWR1P48145 328 aa18.68■□□□□ 0.58
PCDH1-204ENST00000503492 UBE2KP61086 200 aa18.68■□□□□ 0.58
PCDH1-204ENST00000503492 JPT1Q9UK76 154 aa18.68■□□□□ 0.58
PCDH1-204ENST00000503492 DMXL2Q8TDJ6 3036 aa18.68■□□□□ 0.58
PCDH1-204ENST00000503492 A0A1B0GV50 99 aa18.68■□□□□ 0.58
PCDH1-204ENST00000503492 DPRXA6NFQ7 191 aa18.68■□□□□ 0.58
PCDH1-204ENST00000503492 PROP1O75360 226 aa18.68■□□□□ 0.58
PCDH1-204ENST00000503492 CYB5R3P00387 301 aaPredicted RBP18.68■□□□□ 0.58
PCDH1-204ENST00000503492 THBDP07204 575 aa18.68■□□□□ 0.58
PCDH1-204ENST00000503492 ATF4P18848 351 aaPredicted RBP18.68■□□□□ 0.58
PCDH1-204ENST00000503492 TAS2R30P59541 319 aa18.68■□□□□ 0.58
PCDH1-204ENST00000503492 TNFRSF9Q07011 255 aa18.68■□□□□ 0.58
PCDH1-204ENST00000503492 DUX4L9Q6RFH8 374 aaPredicted RBP18.68■□□□□ 0.58
PCDH1-204ENST00000503492 EDARADDQ8WWZ3 215 aa18.68■□□□□ 0.58
PCDH1-204ENST00000503492 HSD17B10Q99714 261 aaKnown RBP18.68■□□□□ 0.58
PCDH1-204ENST00000503492 SNAPINO95295 136 aa18.67■□□□□ 0.58
PCDH1-204ENST00000503492 PTAFRP25105 342 aa18.67■□□□□ 0.58
PCDH1-204ENST00000503492 LOXL3P58215 753 aa18.67■□□□□ 0.58
PCDH1-204ENST00000503492 TCTEX1D1Q8N7M0 179 aa18.67■□□□□ 0.58
PCDH1-204ENST00000503492 C14orf79Q96F83 325 aa18.67■□□□□ 0.58
PCDH1-204ENST00000503492 RBKSQ9H477 322 aa18.67■□□□□ 0.58
PCDH1-204ENST00000503492 HSPB7Q9UBY9 170 aa18.67■□□□□ 0.58
PCDH1-204ENST00000503492 F2RL2O00254 374 aa18.67■□□□□ 0.58
PCDH1-204ENST00000503492 YPEL1O60688 119 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 GPR12P47775 334 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 PPT1P50897 306 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 SPANXN5Q5MJ07 72 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 STUMQ69YW2 141 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 TMEM88Q6PEY1 159 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 TGIF2LYQ8IUE0 185 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 YPEL2Q96QA6 119 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 LRRC30A6NM36 301 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 CLDN14O95500 239 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 IFNA5P01569 189 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 CGB3P0DN86 165 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 CGB7P0DN87 165 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 PEA15Q15121 130 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 NCR3LG1Q68D85 454 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 ZNF561Q8N587 486 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 ZNF525Q8N782 197 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 EIF5A2Q9GZV4 153 aaKnown RBP18.66■□□□□ 0.58
PCDH1-204ENST00000503492 CALYQ9NYX4 217 aa18.66■□□□□ 0.58
PCDH1-204ENST00000503492 IGHV3-7P01780 117 aa18.65■□□□□ 0.58
PCDH1-204ENST00000503492 TNFSF4P23510 183 aa18.65■□□□□ 0.58
PCDH1-204ENST00000503492 SPSB3Q6PJ21 355 aa18.65■□□□□ 0.58
PCDH1-204ENST00000503492 THNSL2Q86YJ6 484 aa18.65■□□□□ 0.58
PCDH1-204ENST00000503492 DEFB108BQ8NET1 73 aa18.65■□□□□ 0.58
PCDH1-204ENST00000503492 SDSLQ96GA7 329 aa18.65■□□□□ 0.58
PCDH1-204ENST00000503492 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.65■□□□□ 0.58
PCDH1-204ENST00000503492 OR6C3Q9NZP0 311 aa18.65■□□□□ 0.58
PCDH1-204ENST00000503492 GPR37O15354 613 aa18.64■□□□□ 0.58
PCDH1-204ENST00000503492 FAM87AP0C7U9 286 aa18.64■□□□□ 0.58
PCDH1-204ENST00000503492 DUTP33316 252 aaKnown RBP18.64■□□□□ 0.58
PCDH1-204ENST00000503492 ZNF134P52741 427 aa18.64■□□□□ 0.58
PCDH1-204ENST00000503492 CCL20P78556 96 aa18.64■□□□□ 0.58
PCDH1-204ENST00000503492 BSPH1Q075Z2 132 aa18.64■□□□□ 0.58
PCDH1-204ENST00000503492 Q8TCH9 128 aa18.64■□□□□ 0.58
PCDH1-204ENST00000503492 DCAF16Q9NXF7 216 aa18.64■□□□□ 0.58
PCDH1-204ENST00000503492 FBXO7Q9Y3I1 522 aa18.64■□□□□ 0.58
PCDH1-204ENST00000503492 RAB29O14966 203 aa18.64■□□□□ 0.57
PCDH1-204ENST00000503492 ADIPOQQ15848 244 aa18.64■□□□□ 0.57
PCDH1-204ENST00000503492 C17orf58Q2M2W7 97 aa18.64■□□□□ 0.57
PCDH1-204ENST00000503492 UTF1Q5T230 341 aa18.64■□□□□ 0.57
PCDH1-204ENST00000503492 CBLN2Q8IUK8 224 aa18.64■□□□□ 0.57
PCDH1-204ENST00000503492 NCOR1P1Q9H4R4 102 aa18.64■□□□□ 0.57
PCDH1-204ENST00000503492 PIEZO2Q9H5I5 2752 aa18.64■□□□□ 0.57
PCDH1-204ENST00000503492 RAI1Q7Z5J4 1906 aaPredicted RBP18.64■□□□□ 0.57
PCDH1-204ENST00000503492 SLC25A24Q6NUK1 477 aa18.63■□□□□ 0.57
PCDH1-204ENST00000503492 LFNGQ8NES3 379 aa18.63■□□□□ 0.57
PCDH1-204ENST00000503492 GAFA1Q96PS6 74 aa18.63■□□□□ 0.57
PCDH1-204ENST00000503492 OR4A8P0C604 315 aa18.63■□□□□ 0.57
PCDH1-204ENST00000503492 AKR1C8PQ5T2L2 129 aa18.63■□□□□ 0.57
PCDH1-204ENST00000503492 DHRS7BQ6IAN0 325 aaPredicted RBP18.63■□□□□ 0.57
PCDH1-204ENST00000503492 H2BFWTQ7Z2G1 175 aa18.63■□□□□ 0.57
PCDH1-204ENST00000503492 RSG1Q9BU20 258 aa18.63■□□□□ 0.57
PCDH1-204ENST00000503492 LAMP3Q9UQV4 416 aa18.63■□□□□ 0.57
PCDH1-204ENST00000503492 MSRB2Q9Y3D2 182 aa18.63■□□□□ 0.57
PCDH1-204ENST00000503492 DYSFO75923 2080 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms