RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 C1orf174Q8IYL3 243 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 FAM122AQ96E09 287 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 ULBP2Q9BZM5 246 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 NRN1Q9NPD7 142 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 TP73-AS1Q9UF72 201 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 NAT8BQ9UHF3 227 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 RPH3ALQ9UNE2 315 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 COX11Q9Y6N1 276 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 CEP250Q9BV73 2442 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 IGLC2P0DOY2 106 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 IGLC3P0DOY3 106 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 DUSP3P51452 185 aaPredicted RBP11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 CLEC2AQ6UVW9 174 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 OR10G8Q8NGN5 311 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 MTIF3Q9H2K0 278 aaKnown RBP11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 SLC45A2Q9UMX9 530 aa11.12□□□□□ -0.63
GAPVD1-220ENST00000497580 H0Y980 276 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 COX5AP20674 150 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 LHFPL2Q6ZUX7 228 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 OXGR1Q96P68 337 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 CLN8Q9UBY8 286 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 NPIPA3F8WFD2 350 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 LHX2P50458 406 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 EDDM3BP56851 147 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 HLA-DRB5Q30154 266 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 KRTCAP3Q53RY4 240 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 UHRF2Q96PU4 802 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 COMPP49747 757 aaPredicted RBP11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 PSG4Q00888 419 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 OR5P3Q8WZ94 311 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 LRFN3Q9BTN0 628 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 LRRC61Q9BV99 259 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 GNB4Q9HAV0 340 aa11.11□□□□□ -0.63
GAPVD1-220ENST00000497580 BCL3P20749 454 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 CDC34P49427 236 aaPredicted RBP11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 OR1D5P58170 312 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 CENPVQ7Z7K6 275 aaPredicted RBP11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 ZDBF2Q9HCK1 2354 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 ZNF253O75346 499 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 GABRG2P18507 467 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 DRD1P21728 446 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 RPL19P84098 196 aaKnown RBP11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 UCN2Q96RP3 112 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 PCDH15Q96QU1 1955 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 A0A1W2PPV4 95 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 OR6C6A6NF89 314 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 VENTXO95231 258 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 RIPPLY3P57055 190 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 RELBQ01201 579 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 OR10G3Q8NGC4 313 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 SLC35D1Q9NTN3 355 aa11.1□□□□□ -0.63
GAPVD1-220ENST00000497580 IGKV1-6A0A0C4DH72 117 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 NPIPB13A6NJU9 1138 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 A8MXE2 369 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 NPIPB4C9JG80 1138 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 DHHO43323 396 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 PSG1P11464 419 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 TMEM144Q7Z5S9 345 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 FAM58AQ8N1B3 248 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 NUDT10Q8NFP7 164 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 APOBEC3DQ96AK3 386 aaPredicted RBP11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 B4GALT1P15291 398 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 TNFSF4P23510 183 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 CAPZBP47756 277 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 Q56UQ5 140 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 PRR31Q5SQ13 230 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 OR8I2Q8N0Y5 310 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 BORCS7Q96B45 105 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 CD207Q9UJ71 328 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 IGKV3D-11A0A0A0MRZ8 115 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 ODAMA1E959 279 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 DPRXA6NFQ7 191 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 SLC25A6P12236 298 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 EN2P19622 333 aaPredicted RBP11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 OR4A47Q6IF82 309 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 OR56B2PQ8NGI1 322 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 RCHY1Q96PM5 261 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 PLSCR2Q9NRY7 297 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 OR1A1Q9P1Q5 309 aa11.09□□□□□ -0.63
GAPVD1-220ENST00000497580 TRIOBPQ9H2D6 2365 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 SCO2A0A1W2PP80 73 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 TSPOP30536 169 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 TCTEX1D1Q8N7M0 179 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 AGBL5Q8NDL9 886 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 ZNF488Q96MN9 340 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 HIPK2Q9H2X6 1198 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 TMEM131Q92545 1883 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 IGKV1-5P01602 117 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 GPX1P07203 203 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 OR8B8Q15620 311 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 PLPPR5Q32ZL2 321 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 KLHDC1Q8N7A1 406 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 OCC1Q8TAD7 63 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 NBEAQ8NFP9 2946 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 IGKV1-39P01597 117 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 IGKV1D-39P04432 117 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 C3orf79P0CE67 100 aa11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 ZNF816Q0VGE8 651 aaPredicted RBP11.08□□□□□ -0.64
GAPVD1-220ENST00000497580 MRPL54Q6P161 138 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms