RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 TNFSF13O75888 250 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 IGLV1-44P01699 117 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 OR5H8P0DN80 308 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 CCNOP22674 350 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 P2RY6Q15077 328 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 C3orf36Q3SXR2 165 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 ASCL5Q7RTU5 278 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 HIST1H2AAQ96QV6 131 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 SPXQ9BT56 116 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 SLC35B3Q9H1N7 401 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 HIPK2Q9H2X6 1198 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 OR51I2Q9H344 312 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 TUBD1Q9UJT1 453 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 CRYM-AS1A6NIL9 109 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 IQCF6A8MYZ5 107 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 ZNF732B4DXR9 585 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 OMGP23515 440 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 UCP3P55916 312 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 OR1J1Q8NGS3 322 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 OR11L1Q8NGX0 322 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 CACNA1GO43497 2377 aa9.8□□□□□ -0.84
SNRNP200-208ENST00000497539 WDR1O75083 606 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 WISP2O76076 250 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 PF4V1P10720 104 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 BCL3P20749 454 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 RAB7AP51149 207 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 GPM6AP51674 278 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 PPP1CBP62140 327 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 PSG3Q16557 428 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 C5orf64Q2M2E5 130 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 SOHLH1Q5JUK2 328 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 RBMXL3Q8N7X1 1067 aaKnown RBP9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 TP53RKQ96S44 253 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 CDH20Q9HBT6 801 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 ZNF286AQ9HBT8 521 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 MTCH1Q9NZJ7 389 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 BORCS7-ASMTA0A0B4J1R7 106 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 E5RGE8 158 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 J3QT63 122 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 DFFBO76075 338 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 NAPSAO96009 420 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 NPBWR2P48146 333 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 TMEM241Q24JQ0 296 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 SMIM21Q3B7S5 101 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 OCIAD2Q56VL3 154 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 SEM1Q6ZVN7 128 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 BATF2Q8N1L9 274 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 RTN4IP1Q8WWV3 396 aaPredicted RBP9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 SLC25A31Q9H0C2 315 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 NSG2Q9Y328 171 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 CELSR3Q9NYQ7 3312 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 LRP5LA4QPB2 252 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 SEC11BP0C7V7 166 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 CEBPDP49716 269 aaPredicted RBP9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 ABCA11PQ4W5N1 156 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 MRPL41Q8IXM3 137 aaKnown RBP9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 SUMF2Q8NBJ7 301 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 FAM222BQ8WU58 562 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 STARD4Q96DR4 205 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 RTL8AQ9BWD3 113 aa9.79□□□□□ -0.84
SNRNP200-208ENST00000497539 DOCK7Q96N67 2140 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 FREM2Q5SZK8 3169 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 FAM24AA6NFZ4 105 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 TRAPPC2LH3BP13 241 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 NXPH3O95157 252 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 CD1BP29016 333 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 P2RY1P47900 373 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 ZNF324BQ6AW86 544 aaPredicted RBP9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 Q6ZPA2 131 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 Q8IYB0 196 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 GPHA2Q96T91 129 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 SYT3Q9BQG1 590 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 OR2J1Q9GZK6 312 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 ZNF71Q9NQZ8 489 aaPredicted RBP9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 PROCRQ9UNN8 238 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 RBM7Q9Y580 266 aaKnown RBP9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 H0YL77 283 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 TK1P04183 234 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 CELA3BP08861 270 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 CXCL1P09341 107 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 ZNF728P0DKX0 622 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 CHRNB4P30926 498 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 TIMP3P35625 211 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 ERVK11-1P61568 191 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 NKX6-1P78426 367 aaPredicted RBP9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 TMEM187Q14656 261 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 RHEBQ15382 184 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 ZNF880Q6PDB4 577 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 TCF24Q7RTU0 167 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 GINS3Q9BRX5 216 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 ARV1Q9H2C2 271 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 HSPB7Q9UBY9 170 aa9.78□□□□□ -0.84
SNRNP200-208ENST00000497539 DNAJC13O75165 2243 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 A0A1B0GV72 72 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 F6UZH7 168 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 H0Y8G0 127 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 KLK10O43240 276 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 GPR137BO60478 399 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 LILRA1O75019 489 aa9.77□□□□□ -0.85
SNRNP200-208ENST00000497539 LYZL6O75951 148 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms