RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 LINC00854A0A1B0GVQ3 168 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 OR5H14A6NHG9 310 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 VGLL3A8MV65 326 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 ECI1P42126 302 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 UCP3P55916 312 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 DIAPH2-AS1Q14236 149 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 MSMO1Q15800 293 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 PLA1AQ53H76 456 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 RPL39P5Q59GN2 51 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 AADACL3Q5VUY0 350 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 ZDHHC16Q969W1 377 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 ZNF251Q9BRH9 671 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 PRDM13Q9H4Q3 707 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 SDHAF2Q9NX18 166 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 REG1BP48304 166 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 TUSC1Q2TAM9 212 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 ZBTB34Q8NCN2 500 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 AKR1E2Q96JD6 320 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 FXYD6Q9H0Q3 95 aa17.57■□□□□ 0.4
C9orf3-222ENST00000496567 IGHV1-3A0A0C4DH29 117 aa17.56■□□□□ 0.4
C9orf3-222ENST00000496567 AANATQ16613 207 aa17.56■□□□□ 0.4
C9orf3-222ENST00000496567 RBMS3Q6XE24 437 aaKnown RBP17.56■□□□□ 0.4
C9orf3-222ENST00000496567 IDO2Q6ZQW0 420 aa17.56■□□□□ 0.4
C9orf3-222ENST00000496567 DRAM1Q8N682 238 aa17.56■□□□□ 0.4
C9orf3-222ENST00000496567 CCL28Q9NRJ3 127 aa17.56■□□□□ 0.4
C9orf3-222ENST00000496567 TBC1D24Q9ULP9 559 aa17.56■□□□□ 0.4
C9orf3-222ENST00000496567 MXRA5Q9NR99 2828 aa17.56■□□□□ 0.4
C9orf3-222ENST00000496567 MTORP42345 2549 aa17.55■□□□□ 0.4
C9orf3-222ENST00000496567 MDFIC2A0A1B0GVS7 189 aa17.55■□□□□ 0.4
C9orf3-222ENST00000496567 A0A1W2PPI3 338 aa17.55■□□□□ 0.4
C9orf3-222ENST00000496567 BRS3P32247 399 aa17.55■□□□□ 0.4
C9orf3-222ENST00000496567 SLC38A6Q8IZM9 456 aa17.55■□□□□ 0.4
C9orf3-222ENST00000496567 ZNF48Q96MX3 618 aaPredicted RBP17.55■□□□□ 0.4
C9orf3-222ENST00000496567 OCEL1Q9H607 264 aa17.55■□□□□ 0.4
C9orf3-222ENST00000496567 M0R1X1 148 aa17.54■□□□□ 0.4
C9orf3-222ENST00000496567 PLA2G10O15496 165 aa17.54■□□□□ 0.4
C9orf3-222ENST00000496567 PROP1O75360 226 aa17.54■□□□□ 0.4
C9orf3-222ENST00000496567 IGLV2-14P01704 120 aa17.54■□□□□ 0.4
C9orf3-222ENST00000496567 PGAM2P15259 253 aa17.54■□□□□ 0.4
C9orf3-222ENST00000496567 PAX6P26367 422 aa17.54■□□□□ 0.4
C9orf3-222ENST00000496567 GNRHRP30968 328 aa17.54■□□□□ 0.4
C9orf3-222ENST00000496567 DYNLT3P51808 116 aa17.54■□□□□ 0.4
C9orf3-222ENST00000496567 SURF2Q15527 256 aaPredicted RBP17.54■□□□□ 0.4
C9orf3-222ENST00000496567 LRRC75BQ2VPJ9 315 aa17.54■□□□□ 0.4
C9orf3-222ENST00000496567 Q6YL49 198 aa17.54■□□□□ 0.4
C9orf3-222ENST00000496567 MOB3BQ86TA1 216 aa17.54■□□□□ 0.4
C9orf3-222ENST00000496567 CMTM1Q8IZ96 169 aa17.54■□□□□ 0.4
C9orf3-222ENST00000496567 POC5Q8NA72 575 aa17.54■□□□□ 0.4
C9orf3-222ENST00000496567 FN1P02751 2386 aaKnown RBP17.54■□□□□ 0.4
C9orf3-222ENST00000496567 TIMM23O14925 209 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 LYRM1O43325 122 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 ZNF818PQ6ZRF7 136 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 SIGLECL1Q8N7X8 197 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 ZFAND1Q8TCF1 268 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 ZNF418Q8TF45 676 aaPredicted RBP17.53■□□□□ 0.4
C9orf3-222ENST00000496567 SCGB3A2Q96PL1 93 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 SSX3Q99909 188 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 NABP2Q9BQ15 211 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 RSRP1Q9BUV0 290 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 MRPL20Q9BYC9 149 aaKnown RBP17.53■□□□□ 0.4
C9orf3-222ENST00000496567 GPR31O00270 319 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 CT45A6P0DMU7 189 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 CT45A5P0DMU8 189 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 CT45A7P0DMV0 189 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 S100GP29377 79 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 DEFA1P59665 94 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 DEFA3P59666 94 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 RGS21Q2M5E4 152 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 BVESQ8NE79 360 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 OR13C8Q8NGS7 320 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 MARCH1Q8TCQ1 289 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 C5orf30Q96GV9 206 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 ZNF486Q96H40 463 aaPredicted RBP17.53■□□□□ 0.4
C9orf3-222ENST00000496567 ADTRPQ96IZ2 230 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 DPAGT1Q9H3H5 408 aa17.53■□□□□ 0.4
C9orf3-222ENST00000496567 THBS3P49746 956 aa17.52■□□□□ 0.39
C9orf3-222ENST00000496567 ASAH1Q13510 395 aa17.52■□□□□ 0.39
C9orf3-222ENST00000496567 HABP2Q14520 560 aaPredicted RBP17.52■□□□□ 0.39
C9orf3-222ENST00000496567 ZNF66Q6ZN08 573 aa17.52■□□□□ 0.39
C9orf3-222ENST00000496567 SSMEM1Q8WWF3 244 aa17.52■□□□□ 0.39
C9orf3-222ENST00000496567 CFHR4Q92496 578 aa17.52■□□□□ 0.39
C9orf3-222ENST00000496567 HSD17B10Q99714 261 aaKnown RBP17.52■□□□□ 0.39
C9orf3-222ENST00000496567 SLC25A21Q9BQT8 299 aaPredicted RBP17.52■□□□□ 0.39
C9orf3-222ENST00000496567 TEP1Q99973 2627 aaKnown RBP17.51■□□□□ 0.39
C9orf3-222ENST00000496567 BTBD17A6NE02 478 aa17.51■□□□□ 0.39
C9orf3-222ENST00000496567 CD1BP29016 333 aa17.51■□□□□ 0.39
C9orf3-222ENST00000496567 DUTP33316 252 aaKnown RBP17.51■□□□□ 0.39
C9orf3-222ENST00000496567 IER3P46695 156 aa17.51■□□□□ 0.39
C9orf3-222ENST00000496567 TAGLNQ01995 201 aaKnown RBP17.51■□□□□ 0.39
C9orf3-222ENST00000496567 BAMBIQ13145 260 aa17.51■□□□□ 0.39
C9orf3-222ENST00000496567 MZT2BQ6NZ67 158 aa17.51■□□□□ 0.39
C9orf3-222ENST00000496567 DRAXINQ8NBI3 349 aaPredicted RBP17.51■□□□□ 0.39
C9orf3-222ENST00000496567 OR5R1Q8NH85 324 aa17.51■□□□□ 0.39
C9orf3-222ENST00000496567 MRGPRFQ96AM1 343 aa17.51■□□□□ 0.39
C9orf3-222ENST00000496567 MC5RP33032 325 aa17.5■□□□□ 0.39
C9orf3-222ENST00000496567 RBMS2Q15434 407 aaKnown RBP17.5■□□□□ 0.39
C9orf3-222ENST00000496567 ABCA11PQ4W5N1 156 aa17.5■□□□□ 0.39
C9orf3-222ENST00000496567 C14orf166Q9Y224 244 aaKnown RBP17.5■□□□□ 0.39
C9orf3-222ENST00000496567 FAM90A9PA6NNJ1 464 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 H3BUX3 64 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms