RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ZNF728P0DKX0 622 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 ZNF44P15621 663 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 S100A1P23297 94 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 ID1P41134 155 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 GABRA2P47869 451 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 RAB13P51153 203 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 LINC01547P58512 204 aaPredicted RBP3.28□□□□□ -1.88
VPS52-222ENST00000495981 SLC35A2P78381 396 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 SSX2Q16385 188 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 MICAQ29983 383 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 SAMD4BQ5PRF9 694 aaKnown RBP3.28□□□□□ -1.88
VPS52-222ENST00000495981 UTF1Q5T230 341 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 CCDC121Q6ZUS5 278 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 OR10G2Q8NGC3 310 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 OR4D10Q8NGI6 311 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 TEX47Q8TBZ9 253 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 OR51E1Q8TCB6 317 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 NUDCD2Q8WVJ2 157 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 MYDGFQ969H8 173 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 MCUR1Q96AQ8 359 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 CMTM5Q96DZ9 223 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 OR5M11Q96RB7 305 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 TTTY10Q9BZA0 68 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 NCOR1P1Q9H4R4 102 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 HEXA-AS1Q9H8Q6 139 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 MOB1AQ9H8S9 216 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 GPR84Q9NQS5 396 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 RASL12Q9NYN1 266 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 SAMHD1Q9Y3Z3 626 aaKnown RBP3.28□□□□□ -1.88
VPS52-222ENST00000495981 V9GYS6 101 aa3.28□□□□□ -1.88
VPS52-222ENST00000495981 TRAV26-1A0A087WT03 109 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 A0A1B0GTI1 187 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 HELTA6NFD8 242 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 DHRS7CA6NNS2 312 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 SMIM1B2RUZ4 78 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 H0Y8G0 127 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 SULT1B1O43704 296 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 MMP23AO75900 390 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 OR2F2O95006 317 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 IGLV1-47P01700 117 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 IGF1P05019 195 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 ALDOBP05062 364 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 MRPL3P09001 348 aaKnown RBP3.27□□□□□ -1.89
VPS52-222ENST00000495981 CD34P28906 385 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 GPR183P32249 361 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 HAAOP46952 286 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 ACTA2P62736 377 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 ACTG2P63267 376 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 ACTC1P68032 377 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 ACTA1P68133 377 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 EDDM3AQ14507 147 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 ZNF829Q3KNS6 432 aaPredicted RBP3.27□□□□□ -1.89
VPS52-222ENST00000495981 KLHL22Q53GT1 634 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 MINOS1Q5TGZ0 78 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 PRAMEF5Q5TYX0 476 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 OR2T5Q6IEZ7 315 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 FAM53AQ6NSI3 398 aaPredicted RBP3.27□□□□□ -1.89
VPS52-222ENST00000495981 DEGS2Q6QHC5 323 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 ATRAIDQ6UW56 229 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 PLEKHG7Q6ZR37 379 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 Q6ZRP5 223 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 C18orf65Q6ZTR6 163 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 SSX6Q7RTT6 188 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 OR2W3Q7Z3T1 314 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 TMEM179BQ7Z7N9 219 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 HS3ST5Q8IZT8 346 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 OSR2Q8N2R0 312 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 OR5A2Q8NGI9 324 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 OR6F1Q8NGZ6 308 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 OR2T29Q8NH02 315 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 TRMT10AQ8TBZ6 339 aaKnown RBP3.27□□□□□ -1.89
VPS52-222ENST00000495981 C11orf52Q96A22 123 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 MALSU1Q96EH3 234 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 AKR1E2Q96JD6 320 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 ZNF714Q96N38 554 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 P2RX4Q99571 388 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 CLEC7AQ9BXN2 247 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 PKIBQ9C010 78 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 CHST5Q9GZS9 411 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 PBOV1Q9GZY1 135 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 OR51V1Q9H2C8 321 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 REEP1Q9H902 201 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 Q9HAA7 133 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 PLEKHA3Q9HB20 300 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 ADGRL4Q9HBW9 690 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 PIPOXQ9P0Z9 390 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 GHRLQ9UBU3 117 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 KLK11Q9UBX7 282 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 MRM2Q9UI43 246 aaKnown RBP3.27□□□□□ -1.89
VPS52-222ENST00000495981 ENPP5Q9UJA9 477 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 PITPNC1Q9UKF7 332 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 SLC22A13Q9Y226 551 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 PIGLQ9Y2B2 252 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 POLDIP2Q9Y2S7 368 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 HILPDAQ9Y5L2 63 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 TSSC4Q9Y5U2 329 aaPredicted RBP3.27□□□□□ -1.89
VPS52-222ENST00000495981 LINC00312Q9Y6C7 94 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 MINOS1-NBL1R4GNA1 71 aa3.27□□□□□ -1.89
VPS52-222ENST00000495981 PKD1P98161 4303 aa3.26□□□□□ -1.89
VPS52-222ENST00000495981 IGHV4-4A0A075B6R2 117 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms