RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CYB5R3P00387 301 aaPredicted RBP16.51■□□□□ 0.23
COL27A1-207ENST00000494090 HSPB1P04792 205 aaKnown RBP16.51■□□□□ 0.23
COL27A1-207ENST00000494090 STAG3L2P0CL84 134 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 IER3P46695 156 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 SPANXN1Q5VSR9 72 aa16.51■□□□□ 0.23
COL27A1-207ENST00000494090 SNURFLB1AK76 121 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 J3QW42 95 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 SP9P0CG40 484 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 REG1BP48304 166 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 ZNF645Q8N7E2 425 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 M0QZK8 103 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 GGCTO75223 188 aaKnown RBP16.5■□□□□ 0.23
COL27A1-207ENST00000494090 HTN1P15515 57 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 PSMB2P49721 201 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 PARP14Q460N5 1801 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 SIAH2O43255 324 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 CIDEAO60543 219 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 OR2H2O95918 312 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 NPIPB13A6NJU9 1138 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 NPIPB4C9JG80 1138 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 PKIAP61925 76 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 PIMREGQ9BSJ6 248 aa16.5■□□□□ 0.23
COL27A1-207ENST00000494090 GREB1LQ9C091 1923 aaPredicted RBP16.5■□□□□ 0.23
COL27A1-207ENST00000494090 CEACAM18A8MTB9 384 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 HIST1H1BP16401 226 aaKnown RBP16.49■□□□□ 0.23
COL27A1-207ENST00000494090 CLDN18P56856 261 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 METTL26Q96S19 204 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 RNF115Q9Y4L5 304 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 APCSP02743 223 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 TMEM78Q5T7P6 136 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 TAF1LQ8IZX4 1826 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 LDLRAD3Q86YD5 345 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 OR10J6PQ8NGY7 276 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 C5orf66Q9H5L9 145 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 CDC42EP3Q9UKI2 254 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 ZNF98A6NK75 572 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 SS18L1O75177 396 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-207ENST00000494090 PGLYRP1O75594 196 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-207ENST00000494090 RPL8P62917 257 aaKnown RBP16.49■□□□□ 0.23
COL27A1-207ENST00000494090 WFDC3Q8IUB2 231 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 SDHCQ99643 169 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-207ENST00000494090 FOXD3Q9UJU5 478 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-207ENST00000494090 DLL1O00548 723 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 RHBDL1O75783 438 aa16.49■□□□□ 0.23
COL27A1-207ENST00000494090 J3KRW8 73 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 WNT9BO14905 357 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 KLF7O75840 302 aaPredicted RBP16.48■□□□□ 0.23
COL27A1-207ENST00000494090 CTSBP07858 339 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 SNAI3Q3KNW1 292 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 NHLRC3Q5JS37 347 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 RSG1Q9BU20 258 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 A0A1W2PPE3 182 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 OR2A4O95047 310 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 LBHQ53QV2 105 aaPredicted RBP16.48■□□□□ 0.23
COL27A1-207ENST00000494090 WDFY1Q8IWB7 410 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 Q96M66 194 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 OR2A7Q96R45 310 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 IDI2-AS1Q9NZ38 188 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 FAM90A26D6RGX4 464 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 PRDM14Q9GZV8 571 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 METTL1Q9UBP6 276 aaKnown RBP16.48■□□□□ 0.23
COL27A1-207ENST00000494090 TRAV30A0A087WSZ9 112 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 A8MWL6 223 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 TMEM14DPA8MWL7 114 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 WNT5AP41221 380 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 EGR4Q05215 589 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 SELENOHQ8IZQ5 122 aaKnown RBP16.48■□□□□ 0.23
COL27A1-207ENST00000494090 SYT8Q8NBV8 401 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 PXMP4Q9Y6I8 212 aa16.48■□□□□ 0.23
COL27A1-207ENST00000494090 SCN4AP35499 1836 aa16.47■□□□□ 0.23
COL27A1-207ENST00000494090 RBM14Q96PK6 669 aaKnown RBP16.47■□□□□ 0.23
COL27A1-207ENST00000494090 CHRNA10Q9GZZ6 450 aa16.47■□□□□ 0.23
COL27A1-207ENST00000494090 THY1P04216 161 aa16.47■□□□□ 0.23
COL27A1-207ENST00000494090 CXorf66Q5JRM2 361 aaPredicted RBP16.47■□□□□ 0.23
COL27A1-207ENST00000494090 TMEM229AB2RXF0 380 aa16.47■□□□□ 0.23
COL27A1-207ENST00000494090 NAT1P18440 290 aa16.47■□□□□ 0.23
COL27A1-207ENST00000494090 SLC35E4Q6ICL7 350 aa16.47■□□□□ 0.23
COL27A1-207ENST00000494090 OR2D3Q8NGH3 330 aa16.47■□□□□ 0.23
COL27A1-207ENST00000494090 TNS1Q9HBL0 1735 aaKnown RBP16.47■□□□□ 0.23
COL27A1-207ENST00000494090 C5orf52A6NGY3 159 aa16.47■□□□□ 0.23
COL27A1-207ENST00000494090 COX6A1P12074 109 aa16.47■□□□□ 0.23
COL27A1-207ENST00000494090 LRRC75AQ8NAA5 344 aa16.47■□□□□ 0.23
COL27A1-207ENST00000494090 SMUG1Q53HV7 270 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 PCSK4Q6UW60 755 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 SGMS2Q8NHU3 365 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 MARVELD3Q96A59 401 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 POM121Q96HA1 1249 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 AURKAIP1Q9NWT8 199 aaPredicted RBP16.46■□□□□ 0.23
COL27A1-207ENST00000494090 IGKV3-11P04433 115 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 RELBQ01201 579 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 RHOVQ96L33 236 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 RBKSQ9H477 322 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 GP6Q9HCN6 339 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 ODAMA1E959 279 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 C1QL1O75973 258 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 PF4V1P10720 104 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 LAMTOR1Q6IAA8 161 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 C19orf48Q6RUI8 117 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 HILPDAQ9Y5L2 63 aa16.46■□□□□ 0.23
COL27A1-207ENST00000494090 CRYBA2P53672 197 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms