RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 OR2W1Q9Y3N9 320 aa11.15□□□□□ -0.62
CCM2-217ENST00000492883 H7C2Y5 167 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 M0R1X1 148 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 SULT1C2O00338 296 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 PEX14O75381 377 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 MC5RP33032 325 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 GLDNQ6ZMI3 551 aaPredicted RBP11.14□□□□□ -0.63
CCM2-217ENST00000492883 Q6ZS46 218 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 LAX1Q8IWV1 398 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.14□□□□□ -0.63
CCM2-217ENST00000492883 OR5AP2Q8NGF4 316 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 MCFD2Q8NI22 146 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 GPX8Q8TED1 209 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 C15orf40Q8WUR7 153 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 SNAPC3Q92966 411 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 RBMXL1Q96E39 390 aaKnown RBP11.14□□□□□ -0.63
CCM2-217ENST00000492883 DIRAS2Q96HU8 199 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 DCUN1D5Q9BTE7 237 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 SLIRPQ9GZT3 109 aaKnown RBP11.14□□□□□ -0.63
CCM2-217ENST00000492883 RBM38Q9H0Z9 239 aaKnown RBP11.14□□□□□ -0.63
CCM2-217ENST00000492883 SCPEP1Q9HB40 452 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 SDHAF2Q9NX18 166 aa11.14□□□□□ -0.63
CCM2-217ENST00000492883 OR5H14A6NHG9 310 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 SH2D7A6NKC9 451 aaPredicted RBP11.13□□□□□ -0.63
CCM2-217ENST00000492883 ZNF701M0R085 212 aaPredicted RBP11.13□□□□□ -0.63
CCM2-217ENST00000492883 PROP1O75360 226 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 TPPPO94811 219 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 AMY1AP04745 511 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 AMY2AP04746 511 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 OR5H8P0DN80 308 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 FCGR2CP31995 323 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 PROK1P58294 105 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 CDK10Q15131 360 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 C11orf88Q6PI97 169 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 SHISA2Q6UWI4 295 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 FAM131AQ6UXB0 335 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 Q8N2B8 174 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 OR8H1Q8NGG4 311 aa11.13□□□□□ -0.63
CCM2-217ENST00000492883 H0YJW9 148 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 FGF16O43320 207 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 PMP2P02689 132 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 VSIG10L2P0DP72 767 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 NAT1P18440 290 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 HLA-DMAP28067 261 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 VDAC2P45880 294 aaPredicted RBP11.12□□□□□ -0.63
CCM2-217ENST00000492883 F2RL1P55085 397 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 LINC00205P59089 165 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 TAS2R46P59540 309 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 ACTBP60709 375 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 MMDQ15546 238 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 RNASE12Q5GAN4 147 aaKnown RBP11.12□□□□□ -0.63
CCM2-217ENST00000492883 Q8N6K4 173 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 C5orf56Q8N8D9 126 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 OR5AN1Q8NGI8 311 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 OR5H2Q8NGV7 314 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 WFDC12Q8WWY7 111 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 ABHD1Q96SE0 405 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 RASL11BQ9BPW5 248 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 EHFQ9NZC4 300 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 NDUFA13Q9P0J0 144 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 ANAPC10Q9UM13 185 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 WASHC3Q9Y3C0 194 aa11.12□□□□□ -0.63
CCM2-217ENST00000492883 RBBP9O75884 186 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 TUSC2O75896 110 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 SLC22A5O76082 557 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 APOA2P02652 100 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 AADACP22760 399 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 RCVRNP35243 200 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 RFX2P48378 723 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 SRSF4Q08170 494 aaKnown RBP11.11□□□□□ -0.63
CCM2-217ENST00000492883 LYSMD2Q8IV50 215 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 ZNF645Q8N7E2 425 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 ZNF383Q8NA42 475 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 GIMAP1Q8WWP7 306 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 FCAMRQ8WWV6 532 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 DGCR14Q96DF8 476 aaKnown RBP11.11□□□□□ -0.63
CCM2-217ENST00000492883 RITA1Q96K30 269 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 NXF2Q9GZY0 626 aaKnown RBP11.11□□□□□ -0.63
CCM2-217ENST00000492883 PLSCR3Q9NRY6 295 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 SERTAD4Q9NUC0 356 aa11.11□□□□□ -0.63
CCM2-217ENST00000492883 IGKV1D-13A0A0B4J2D9 117 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 DPPA5A6NC42 116 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 PPYP01298 95 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 IGKV1-13P0DP09 117 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 TNFSF8P32971 234 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 THBS3P49746 956 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 FXYD4P59646 89 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 IL18Q14116 193 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 TMEM95Q3KNT9 176 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 PYHIN1Q6K0P9 492 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 OVCH2Q7RTZ1 564 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 KLHDC1Q8N7A1 406 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 Q8N9W7 124 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 OR6F1Q8NGZ6 308 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 OR52I2Q8NH67 350 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 SECTM1Q8WVN6 248 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 ADTRPQ96IZ2 230 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 MMP27Q9H306 513 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 SLC35D1Q9NTN3 355 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 LIN7CQ9NUP9 197 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms