RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ZNF729A6NN14 1252 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-219ENST00000491128 MBPP02686 304 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-219ENST00000491128 S100GP29377 79 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 LPAR6P43657 344 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 TAGLNQ01995 201 aaKnown RBP11.43□□□□□ -0.58
SMPD4-219ENST00000491128 SRSF4Q08170 494 aaKnown RBP11.43□□□□□ -0.58
SMPD4-219ENST00000491128 CXorf66Q5JRM2 361 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-219ENST00000491128 SP5Q6BEB4 398 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-219ENST00000491128 PDZD9Q8IXQ8 264 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 VKORC1L1Q8N0U8 176 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 OR1S1Q8NH92 325 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 RNASE11Q8TAA1 199 aaKnown RBP11.43□□□□□ -0.58
SMPD4-219ENST00000491128 THAP6Q8TBB0 222 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 NEU4Q8WWR8 484 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-219ENST00000491128 IGFBPL1Q8WX77 278 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 RBPMSQ93062 196 aaKnown RBP11.43□□□□□ -0.58
SMPD4-219ENST00000491128 TMEM56Q96MV1 263 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 TMEM56-RWDD3S4R434 201 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 SAA2-SAA4A0A096LPE2 208 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 RGS11O94810 467 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 F12P00748 615 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-219ENST00000491128 SAA2P0DJI9 122 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-219ENST00000491128 G6PCP35575 357 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 HIST2H2BCQ6DN03 193 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 SPAG16Q8N0X2 631 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 RAB1CQ92928 201 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 AKR1E2Q96JD6 320 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 GON7Q9BXV9 100 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 DOCK11Q5JSL3 2073 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 C22orf46C9J442 243 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 S1PR2O95136 353 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 CFDP00746 253 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-219ENST00000491128 IGKV1-5P01602 117 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 AKR1C2P52895 323 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 IL15RAQ13261 267 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 SSX9Q7RTT3 188 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 LRTM2Q8N967 370 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 EDARADDQ8WWZ3 215 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 TIMD4Q96H15 378 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 CHODLQ9H9P2 273 aa11.42□□□□□ -0.58
SMPD4-219ENST00000491128 RPUSD1Q9UJJ7 312 aaKnown RBP11.42□□□□□ -0.58
SMPD4-219ENST00000491128 TANC2Q9HCD6 1990 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 WNK2Q9Y3S1 2297 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 FCGR3BO75015 233 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 IGHV4-39P01824 125 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 WNT2P09544 360 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 PAX6P26367 422 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 GPR6P46095 362 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-219ENST00000491128 EIF4EBP1Q13541 118 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-219ENST00000491128 WDR25Q64LD2 544 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-219ENST00000491128 TMUB2Q71RG4 321 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 ODF3L1Q8IXM7 274 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 C11orf42Q8N5U0 333 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 OR8H1Q8NGG4 311 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 CORO2AQ92828 525 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 GPR146Q96CH1 333 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 HEXA-AS1Q9H8Q6 139 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 NSG2Q9Y328 171 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 DOPEY2Q9Y3R5 2298 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 RNF222A6NCQ9 220 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 NDUFA2O43678 99 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 CCL19Q99731 98 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 BPESC1Q9GZL8 116 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 TOLLIPQ9H0E2 274 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 GAL3ST2Q9H3Q3 398 aa11.41□□□□□ -0.58
SMPD4-219ENST00000491128 DUTP33316 252 aaKnown RBP11.4□□□□□ -0.58
SMPD4-219ENST00000491128 EFNA4P52798 201 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 POLR2GP62487 172 aaKnown RBP eCLIP11.4□□□□□ -0.58
SMPD4-219ENST00000491128 MEF2CQ06413 473 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-219ENST00000491128 FGL1Q08830 312 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 OPCMLQ14982 345 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 CCDC28AQ8IWP9 274 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 OR8B3Q8NGG8 313 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 OR8B2Q96RD0 313 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 LPAR2Q9HBW0 351 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 ONECUT1Q9UBC0 465 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 TNFSF18Q9UNG2 199 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 PPIAL4CA0A0B4J2A2 164 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 PPIAL4GP0DN37 164 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 ARF6P62330 175 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 GNB2P62879 340 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 CYCSP99999 105 aaKnown RBP11.4□□□□□ -0.58
SMPD4-219ENST00000491128 TMEM155Q4W5P6 130 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 NMSQ5H8A3 153 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 HEPN1Q6WQI6 88 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 ZNF439Q8NDP4 499 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 LIN7CQ9NUP9 197 aaKnown RBP11.4□□□□□ -0.58
SMPD4-219ENST00000491128 TMED3Q9Y3Q3 217 aa11.4□□□□□ -0.58
SMPD4-219ENST00000491128 A0A1W2PRD5 423 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 A0A1W2PRF3 423 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 A0A1W2PRM7 423 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 VDAC1P21796 283 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 COX7A1P24310 79 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 MRPS11P82912 194 aaKnown RBP11.39□□□□□ -0.59
SMPD4-219ENST00000491128 NEIL1Q96FI4 390 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-219ENST00000491128 SIRT7Q9NRC8 400 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 CACNG5Q9UF02 275 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 OVOL3O00110 214 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 ZFP36P26651 326 aaKnown RBP11.39□□□□□ -0.59
SMPD4-219ENST00000491128 DLX6P56179 175 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms