RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 SCGB3A2Q96PL1 93 aa6.18□□□□□ -1.42
CLDN1-202ENST00000490800 RTBDNQ9BSG5 229 aaPredicted RBP6.18□□□□□ -1.42
CLDN1-202ENST00000490800 SSBP3Q9BWW4 388 aaPredicted RBP6.18□□□□□ -1.42
CLDN1-202ENST00000490800 MS4A7Q9GZW8 240 aaPredicted RBP6.18□□□□□ -1.42
CLDN1-202ENST00000490800 C5orf66Q9H5L9 145 aa6.18□□□□□ -1.42
CLDN1-202ENST00000490800 OR6C3Q9NZP0 311 aa6.18□□□□□ -1.42
CLDN1-202ENST00000490800 SLC25A10Q9UBX3 287 aaPredicted RBP6.18□□□□□ -1.42
CLDN1-202ENST00000490800 MIOXQ9UGB7 285 aa6.18□□□□□ -1.42
CLDN1-202ENST00000490800 SLC23A1Q9UHI7 598 aa6.18□□□□□ -1.42
CLDN1-202ENST00000490800 WNK2Q9Y3S1 2297 aa6.18□□□□□ -1.42
CLDN1-202ENST00000490800 DOCK11Q5JSL3 2073 aa6.18□□□□□ -1.42
CLDN1-202ENST00000490800 IGKV1D-13A0A0B4J2D9 117 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 FAM172BPA6NC97 362 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 SNRPGP15A8MWD9 76 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 NDUFB3O43676 98 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 PFDN1O60925 122 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 CTSDP07339 412 aaPredicted RBP6.17□□□□□ -1.42
CLDN1-202ENST00000490800 OR4E1P0C645 316 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 TRAPPC2P0DI81 140 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 TRAPPC2BP0DI82 140 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 IGHV4-38-2P0DP08 117 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 IGKV1-13P0DP09 117 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 HKR1P10072 659 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 NDUFB7P17568 137 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 PI3P19957 117 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 GZMHP20718 246 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 ZBTB25P24278 435 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 TAS2R31P59538 309 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 FXYD4P59646 89 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 RRAS2P62070 204 aaPredicted RBP6.17□□□□□ -1.42
CLDN1-202ENST00000490800 GNB2P62879 340 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 DHODHQ02127 395 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 CBX3Q13185 183 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 PPP1R1AQ13522 171 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 C17orf58Q2M2W7 97 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 C4orf46Q504U0 113 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 LRRC10Q5BKY1 277 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 ZNF626Q68DY1 528 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 FAM53AQ6NSI3 398 aaPredicted RBP6.17□□□□□ -1.42
CLDN1-202ENST00000490800 BTNL3Q6UXE8 466 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 LDLRAD3Q86YD5 345 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 PRR18Q8N4B5 295 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 OR52L2PQ8NGH6 319 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 OR10J5Q8NHC4 309 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 RFESDQ8TAC1 157 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 IL1F10Q8WWZ1 152 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 CORO2AQ92828 525 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 TOMM40LQ969M1 308 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 DACT3Q96B18 629 aaPredicted RBP6.17□□□□□ -1.42
CLDN1-202ENST00000490800 GALMQ96C23 342 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 NEIL1Q96FI4 390 aaPredicted RBP6.17□□□□□ -1.42
CLDN1-202ENST00000490800 NEURL2Q9BR09 285 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 TOLLIPQ9H0E2 274 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 PARP12Q9H0J9 701 aaKnown RBP6.17□□□□□ -1.42
CLDN1-202ENST00000490800 GPN1Q9HCN4 374 aaPredicted RBP6.17□□□□□ -1.42
CLDN1-202ENST00000490800 C19orf12Q9NSK7 152 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 CALYQ9NYX4 217 aa6.17□□□□□ -1.42
CLDN1-202ENST00000490800 TRGV10A0A0A0MS01 117 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 IGHV2-70DA0A0C4DH43 119 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 KBTBD11-OT1A0A1B0GTJ5 212 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 hADV38S2A0JD32 116 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 C9orf170A2RU37 121 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 DNAJC9-AS1A6NH13 148 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 F2RL2O00254 374 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 DVL1O14640 695 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 SPINT2O43291 252 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 HSPA12AO43301 675 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 CREBL2O60519 120 aaPredicted RBP6.16□□□□□ -1.42
CLDN1-202ENST00000490800 AKR1C4P17516 323 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 CEACAM6P40199 344 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 UBE2MP61081 183 aaKnown RBP6.16□□□□□ -1.42
CLDN1-202ENST00000490800 RPL31P62899 125 aaKnown RBP6.16□□□□□ -1.42
CLDN1-202ENST00000490800 SUPT4H1P63272 117 aaKnown RBP6.16□□□□□ -1.42
CLDN1-202ENST00000490800 HTD2P86397 168 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 MEF2CQ06413 473 aaPredicted RBP6.16□□□□□ -1.42
CLDN1-202ENST00000490800 CD300CQ08708 224 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 FOXL1Q12952 345 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 DHRS2Q13268 280 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 ZNF273Q14593 569 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 GNMTQ14749 295 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 FCN2Q15485 313 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 SLC9A3R2Q15599 337 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 CT83Q5H943 113 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 WDR25Q64LD2 544 aaPredicted RBP6.16□□□□□ -1.42
CLDN1-202ENST00000490800 ZNF841Q6ZN19 808 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 LYG2Q86SG7 212 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 SLC38A6Q8IZM9 456 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 ZNF565Q8N9K5 539 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 OR8B3Q8NGG8 313 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 SGMS2Q8NHU3 365 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 ZFAND1Q8TCF1 268 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 ZNF431Q8TF32 576 aaPredicted RBP6.16□□□□□ -1.42
CLDN1-202ENST00000490800 SECTM1Q8WVN6 248 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 TAF15Q92804 592 aaKnown RBP eCLIP6.16□□□□□ -1.42
CLDN1-202ENST00000490800 OR8B2Q96RD0 313 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 SLC5A7Q9GZV3 580 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 MED28Q9H204 178 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 LINC00574Q9H8X3 128 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 RDH8Q9NYR8 311 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 CLN8Q9UBY8 286 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms