RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 MOSP00540 346 aa14.83□□□□□ -0.04
PTCD3-217ENST00000488801 HES1Q14469 280 aa14.83□□□□□ -0.04
PTCD3-217ENST00000488801 LAX1Q8IWV1 398 aa14.83□□□□□ -0.04
PTCD3-217ENST00000488801 OR2T6Q8NHC8 308 aa14.83□□□□□ -0.04
PTCD3-217ENST00000488801 RBMXL1Q96E39 390 aaKnown RBP14.83□□□□□ -0.04
PTCD3-217ENST00000488801 PRSS22Q9GZN4 317 aa14.83□□□□□ -0.04
PTCD3-217ENST00000488801 OR2D2Q9H210 308 aa14.83□□□□□ -0.04
PTCD3-217ENST00000488801 SCPEP1Q9HB40 452 aa14.83□□□□□ -0.04
PTCD3-217ENST00000488801 H0YJW9 148 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 CTDSP2O14595 271 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 OR8U9P0C7N5 309 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 PRSS3P35030 304 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 GPR12P47775 334 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 FAM71E2Q8N5Q1 922 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 C3orf56Q8N813 242 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 OR8H1Q8NGG4 311 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 OR8U1Q8NH10 309 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 CITED1Q99966 193 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 WNT10AQ9GZT5 417 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 SDHAF2Q9NX18 166 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 RSL24D1Q9UHA3 163 aaKnown RBP14.82□□□□□ -0.04
PTCD3-217ENST00000488801 RNF150Q9ULK6 438 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 OR2W1Q9Y3N9 320 aa14.82□□□□□ -0.04
PTCD3-217ENST00000488801 SMIM31A0A1B0GVY4 71 aa14.81□□□□□ -0.04
PTCD3-217ENST00000488801 MEIS3P1A6NDR6 274 aa14.81□□□□□ -0.04
PTCD3-217ENST00000488801 IGLV2-14P01704 120 aa14.81□□□□□ -0.04
PTCD3-217ENST00000488801 NFYAP23511 347 aaPredicted RBP14.81□□□□□ -0.04
PTCD3-217ENST00000488801 Q8N9W7 124 aa14.81□□□□□ -0.04
PTCD3-217ENST00000488801 OR5AP2Q8NGF4 316 aa14.81□□□□□ -0.04
PTCD3-217ENST00000488801 EXTL2Q9UBQ6 330 aa14.81□□□□□ -0.04
PTCD3-217ENST00000488801 ZNF221Q9UK13 617 aa14.81□□□□□ -0.04
PTCD3-217ENST00000488801 VWFP04275 2813 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 IGKV1D-13A0A0B4J2D9 117 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 FAM25AB3EWG3 89 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 FAM25CB3EWG5 89 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 FAM25GB3EWG6 89 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 SULT1C2O00338 296 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 IGKV1-13P0DP09 117 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 HNF4GQ14541 408 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 TMEM95Q3KNT9 176 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 ABCA11PQ4W5N1 156 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 ZNF660Q6AZW8 331 aaPredicted RBP14.8□□□□□ -0.04
PTCD3-217ENST00000488801 SHISA2Q6UWI4 295 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 FAM131AQ6UXB0 335 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 GLDNQ6ZMI3 551 aaPredicted RBP14.8□□□□□ -0.04
PTCD3-217ENST00000488801 ZNF383Q8NA42 475 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 PKD1L1Q8TDX9 2849 aa14.8□□□□□ -0.04
PTCD3-217ENST00000488801 NDUFA3O95167 84 aa14.79□□□□□ -0.04
PTCD3-217ENST00000488801 F2RL1P55085 397 aa14.79□□□□□ -0.04
PTCD3-217ENST00000488801 ARPC4P59998 168 aa14.79□□□□□ -0.04
PTCD3-217ENST00000488801 EIF4EBP1Q13541 118 aaPredicted RBP14.79□□□□□ -0.04
PTCD3-217ENST00000488801 CDK10Q15131 360 aa14.79□□□□□ -0.04
PTCD3-217ENST00000488801 OVCH2Q7RTZ1 564 aa14.79□□□□□ -0.04
PTCD3-217ENST00000488801 SNX29P2Q8IUI4 249 aa14.79□□□□□ -0.04
PTCD3-217ENST00000488801 ZNF645Q8N7E2 425 aa14.79□□□□□ -0.04
PTCD3-217ENST00000488801 DDB2Q92466 427 aa14.79□□□□□ -0.04
PTCD3-217ENST00000488801 RITA1Q96K30 269 aa14.79□□□□□ -0.04
PTCD3-217ENST00000488801 ABHD1Q96SE0 405 aa14.79□□□□□ -0.04
PTCD3-217ENST00000488801 IFT46Q9NQC8 304 aa14.79□□□□□ -0.04
PTCD3-217ENST00000488801 LIN7CQ9NUP9 197 aaKnown RBP14.79□□□□□ -0.04
PTCD3-217ENST00000488801 NECAP2Q9NVZ3 263 aa14.79□□□□□ -0.04
PTCD3-217ENST00000488801 WASHC3Q9Y3C0 194 aa14.79□□□□□ -0.04
PTCD3-217ENST00000488801 SH2D7A6NKC9 451 aaPredicted RBP14.78□□□□□ -0.04
PTCD3-217ENST00000488801 OR5H8P0DN80 308 aa14.78□□□□□ -0.04
PTCD3-217ENST00000488801 MC5RP33032 325 aa14.78□□□□□ -0.04
PTCD3-217ENST00000488801 LINC00205P59089 165 aa14.78□□□□□ -0.04
PTCD3-217ENST00000488801 ACTBP60709 375 aa14.78□□□□□ -0.04
PTCD3-217ENST00000488801 SRSF4Q08170 494 aaKnown RBP14.78□□□□□ -0.04
PTCD3-217ENST00000488801 MSMO1Q15800 293 aa14.78□□□□□ -0.04
PTCD3-217ENST00000488801 LYSMD2Q8IV50 215 aa14.78□□□□□ -0.04
PTCD3-217ENST00000488801 KLHDC1Q8N7A1 406 aa14.78□□□□□ -0.04
PTCD3-217ENST00000488801 NPBQ8NG41 125 aa14.78□□□□□ -0.04
PTCD3-217ENST00000488801 MRPS7Q9Y2R9 242 aaKnown RBP14.78□□□□□ -0.04
PTCD3-217ENST00000488801 A3GALT2U3KPV4 340 aa14.78□□□□□ -0.04
PTCD3-217ENST00000488801 CMYA5Q8N3K9 4069 aa14.78□□□□□ -0.04
PTCD3-217ENST00000488801 M0R1X1 148 aa14.77□□□□□ -0.05
PTCD3-217ENST00000488801 RBBP9O75884 186 aa14.77□□□□□ -0.05
PTCD3-217ENST00000488801 IGHG2P01859 326 aa14.77□□□□□ -0.05
PTCD3-217ENST00000488801 FCER2P06734 321 aa14.77□□□□□ -0.05
PTCD3-217ENST00000488801 CNTFRP26992 372 aa14.77□□□□□ -0.05
PTCD3-217ENST00000488801 DUTP33316 252 aaKnown RBP14.77□□□□□ -0.05
PTCD3-217ENST00000488801 RCVRNP35243 200 aa14.77□□□□□ -0.05
PTCD3-217ENST00000488801 VDAC2P45880 294 aaPredicted RBP14.77□□□□□ -0.05
PTCD3-217ENST00000488801 LUMP51884 338 aaPredicted RBP14.77□□□□□ -0.05
PTCD3-217ENST00000488801 TAS2R46P59540 309 aa14.77□□□□□ -0.05
PTCD3-217ENST00000488801 DYRK1AQ13627 763 aa14.77□□□□□ -0.05
PTCD3-217ENST00000488801 PDPNQ86YL7 162 aa14.77□□□□□ -0.05
PTCD3-217ENST00000488801 DRAXINQ8NBI3 349 aaPredicted RBP14.77□□□□□ -0.05
PTCD3-217ENST00000488801 GIMAP1Q8WWP7 306 aa14.77□□□□□ -0.05
PTCD3-217ENST00000488801 LINC00473A8K010 186 aa14.76□□□□□ -0.05
PTCD3-217ENST00000488801 RGS5O15539 181 aa14.76□□□□□ -0.05
PTCD3-217ENST00000488801 SLC22A5O76082 557 aa14.76□□□□□ -0.05
PTCD3-217ENST00000488801 PPYP01298 95 aa14.76□□□□□ -0.05
PTCD3-217ENST00000488801 IGKV1-16P04430 117 aa14.76□□□□□ -0.05
PTCD3-217ENST00000488801 AADACP22760 399 aa14.76□□□□□ -0.05
PTCD3-217ENST00000488801 FCGR2CP31995 323 aa14.76□□□□□ -0.05
PTCD3-217ENST00000488801 FOXB2Q5VYV0 432 aa14.76□□□□□ -0.05
PTCD3-217ENST00000488801 MCFD2Q8NI22 146 aa14.76□□□□□ -0.05
PTCD3-217ENST00000488801 C15orf40Q8WUR7 153 aa14.76□□□□□ -0.05
PTCD3-217ENST00000488801 RNF5Q99942 180 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms