RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 IFITM3Q01628 133 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 HIST1H1AQ02539 215 aaPredicted RBP2.23□□□□□ -2.05
RBM28-207ENST00000488249 JOSD1Q15040 202 aaPredicted RBP2.23□□□□□ -2.05
RBM28-207ENST00000488249 MORN2Q502X0 79 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 C11orf71Q6IPW1 123 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 UFSP1Q6NVU6 142 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 C2orf66Q6UXQ4 117 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 RNF165Q6ZSG1 346 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 Q6ZSR6 202 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 LINC01551Q86U37 167 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 SNX29P2Q8IUI4 249 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 C20orf196Q8IYI0 205 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 EXOC3-AS1Q8N2X6 119 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 OR4E2Q8NGC2 313 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 OR13C8Q8NGS7 320 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 OR2A12Q8NGT7 310 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 OR5W2Q8NH69 310 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 OR10G6Q8NH81 332 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 OR1L1Q8NH94 360 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 SFT2D1Q8WV19 159 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 SLC7A6Q92536 515 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 CCL17Q92583 94 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 PLEKHB2Q96CS7 222 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 PHYHIPLQ96FC7 376 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 SLC25A44Q96H78 314 aaPredicted RBP2.23□□□□□ -2.05
RBM28-207ENST00000488249 TMEM101Q96IK0 257 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 LYSMD1Q96S90 227 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 NDFIP1Q9BT67 221 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 SMIM3Q9BZL3 60 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 SELENOIQ9C0D9 397 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 SLC25A31Q9H0C2 315 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 CDC42EP4Q9H3Q1 356 aaKnown RBP2.23□□□□□ -2.05
RBM28-207ENST00000488249 CACYBPQ9HB71 228 aaKnown RBP2.23□□□□□ -2.05
RBM28-207ENST00000488249 SLCO1B3Q9NPD5 702 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 PRTFDC1Q9NRG1 225 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 RBFOX1Q9NWB1 397 aaKnown RBP2.23□□□□□ -2.05
RBM28-207ENST00000488249 ANAPC11Q9NYG5 84 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 XCL2Q9UBD3 114 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 ZNF230Q9UIE0 474 aaPredicted RBP2.23□□□□□ -2.05
RBM28-207ENST00000488249 DOCK3Q8IZD9 2030 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 ROBO3Q96MS0 1386 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 BAZ2AQ9UIF9 1905 aaKnown RBP2.23□□□□□ -2.05
RBM28-207ENST00000488249 MED23Q9ULK4 1368 aa2.23□□□□□ -2.05
RBM28-207ENST00000488249 PHLPP1O60346 1717 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 CHD2O14647 1828 aaKnown RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 XIRP1Q702N8 1843 aaKnown RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 COL16A1Q07092 1604 aaPredicted RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 TRAV39A0A0B4J263 110 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 A0A0B4J2A0 478 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 IGHV3OR16-9A0A0B4J2B5 98 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 C5orf49A4QMS7 147 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 C5orf63A6NC05 138 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 DUSP14O95147 198 aaKnown RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 NDUFC2O95298 119 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 IFNA17P01571 189 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 HBZP02008 142 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 P0C879 139 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 CTLA4P16410 223 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 RAB3BP20337 219 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 CCL1P22362 96 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 CNTFRP26992 372 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 HSPA9P38646 679 aaKnown RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 VDAC2P45880 294 aaPredicted RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 SLC18A1P54219 525 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 CTBP2P56545 445 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 DEFA3P59666 94 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 DAD1P61803 113 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 NCS1P62166 190 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 SNRPD2P62316 118 aaKnown RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 PPP3R1P63098 170 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 RPS21P63220 83 aaKnown RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 SELENOWP63302 87 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 ZNF763Q0D2J5 394 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 LAMTOR4Q0VGL1 99 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 DAZ2Q13117 558 aaKnown RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 BTN1A1Q13410 526 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 HTR4Q13639 388 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 ARFRP1Q13795 201 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 FZD2Q14332 565 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 KIAA0040Q15053 153 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 PAFAH1B3Q15102 231 aaKnown RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 EBPQ15125 230 aaKnown RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 C12orf74Q32Q52 190 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 TMEM69Q5SWH9 247 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 IBA57Q5T440 356 aaKnown RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 TMEM236Q5W0B7 351 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 LCN8Q6JVE9 175 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 TEX261Q6UWH6 196 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 CLEC19AQ6UXS0 136 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 IL34Q6ZMJ4 242 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 ZNF620Q6ZNG0 422 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 DAZ4Q86SG3 579 aaKnown RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 C9orf40Q8IXQ3 194 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 PDZD9Q8IXQ8 264 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 ZNF433Q8N7K0 673 aaPredicted RBP2.22□□□□□ -2.05
RBM28-207ENST00000488249 ZNF615Q8N8J6 731 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 GDPD1Q8N9F7 314 aa2.22□□□□□ -2.05
RBM28-207ENST00000488249 OR5H6Q8NGV6 325 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms