RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 VAX2Q9UIW0 290 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 TP53TG5Q9Y2B4 290 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 SLC25A15Q9Y619 301 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 IGHV3OR15-7A0A075B7D8 119 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 TRAV38-1A0A0B4J264 116 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 LOC102723971A0A1B0GUV8 181 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 C16orf97H3BN30 126 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 ZNF737O75373 536 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 S1PR2O95136 353 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 NQO2P16083 231 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 BMP5P22003 454 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 RPL35P42766 123 aaKnown RBP2.23□□□□□ -2.05
C9orf72-205ENST00000488117 RPS10P46783 165 aaKnown RBP2.23□□□□□ -2.05
C9orf72-205ENST00000488117 GLIPR1P48060 266 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 NKX6-1P78426 367 aaPredicted RBP2.23□□□□□ -2.05
C9orf72-205ENST00000488117 HNF4GQ14541 408 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 RTP5Q14D33 572 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 LRRC75BQ2VPJ9 315 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 RNF212Q495C1 297 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 C20orf204Q6ZNR8 217 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 MRGPRGQ86SM5 289 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 WDR86Q86TI4 376 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 OR10G4Q8NGN3 311 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 OR10G9Q8NGN4 311 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 OR10G7Q8NGN6 311 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 RFESDQ8TAC1 157 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 ITLN1Q8WWA0 313 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 NEIL1Q96FI4 390 aaPredicted RBP2.23□□□□□ -2.05
C9orf72-205ENST00000488117 BSCL2Q96G97 398 aaPredicted RBP2.23□□□□□ -2.05
C9orf72-205ENST00000488117 UHRF2Q96PU4 802 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 GPHA2Q96T91 129 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 ZNF251Q9BRH9 671 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 ABHD14AQ9BUJ0 271 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 CALYQ9NYX4 217 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 IL19Q9UHD0 177 aa2.23□□□□□ -2.05
C9orf72-205ENST00000488117 GOLGA4Q13439 2230 aaKnown RBP2.23□□□□□ -2.05
C9orf72-205ENST00000488117 CTXND1A0A1B0GTU2 59 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 ZNF729A6NN14 1252 aaPredicted RBP2.22□□□□□ -2.05
C9orf72-205ENST00000488117 PROB1E7EW31 1015 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 H3BQ15 152 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 TM4SF5O14894 197 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 SIGLEC5O15389 551 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 MLNRO43193 412 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 NDUFB3O43676 98 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 MPDU1O75352 247 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 PTBP3O95758 552 aaKnown RBP2.22□□□□□ -2.05
C9orf72-205ENST00000488117 F12P00748 615 aaPredicted RBP2.22□□□□□ -2.05
C9orf72-205ENST00000488117 IGLV1-44P01699 117 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 IGHV3-13P01766 116 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 S100A8P05109 93 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 BCL2P10415 239 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 ID4P47928 161 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 SPCS3P61009 180 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 RUNX1Q01196 453 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 FOXF2Q12947 444 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 SMUG1Q53HV7 270 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 LRRC10Q5BKY1 277 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 XP32Q5T750 250 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 SSX9Q7RTT3 188 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 SLC35E3Q7Z769 313 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 ZNF525Q8N782 197 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 OR13A1Q8NGR1 328 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 TAF15Q92804 592 aaKnown RBP eCLIP2.22□□□□□ -2.05
C9orf72-205ENST00000488117 HINT2Q9BX68 163 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 WDR61Q9GZS3 305 aaKnown RBP2.22□□□□□ -2.05
C9orf72-205ENST00000488117 CTDSP1Q9GZU7 261 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 TUBA4BQ9H853 241 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 SEBOXQ9HB31 216 aaPredicted RBP2.22□□□□□ -2.05
C9orf72-205ENST00000488117 IDI2-AS1Q9NZ38 188 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 CLN8Q9UBY8 286 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 FREM3P0C091 2139 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 KIF26BQ2KJY2 2108 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 RALGAPA1Q6GYQ0 2036 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 MED19A0JLT2 244 aaPredicted RBP2.22□□□□□ -2.05
C9orf72-205ENST00000488117 CXorf65A6NEN9 183 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 ZNF727A8MUV8 499 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 YPEL1O60688 119 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 C1QL1O75973 258 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 FOLR2P14207 255 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 DAOP14920 347 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 ADCYAP1P18509 176 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 CDC34P49427 236 aaPredicted RBP2.22□□□□□ -2.05
C9orf72-205ENST00000488117 FHITP49789 147 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 SUB1P53999 127 aaKnown RBP eCLIP2.22□□□□□ -2.05
C9orf72-205ENST00000488117 MRPS11P82912 194 aaKnown RBP2.22□□□□□ -2.05
C9orf72-205ENST00000488117 FOXC1Q12948 553 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 GUSBP1Q15486 140 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 Q6ZS92 163 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 MYPOPQ86VE0 399 aaPredicted RBP2.22□□□□□ -2.05
C9orf72-205ENST00000488117 ZFP82Q8N141 532 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 NUP37Q8NFH4 326 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 OR4F5Q8NH21 305 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 LYPD6BQ8NI32 183 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 H1FXQ92522 213 aaKnown RBP2.22□□□□□ -2.05
C9orf72-205ENST00000488117 YPEL2Q96QA6 119 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 OR4F4Q96R69 305 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 NCOR1P1Q9H4R4 102 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 HSPB7Q9UBY9 170 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 NAT8Q9UHE5 227 aa2.22□□□□□ -2.05
C9orf72-205ENST00000488117 SH3BGRL2Q9UJC5 107 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms