RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 DGCR14Q96DF8 476 aaKnown RBP13.66□□□□□ -0.22
SHROOM1-205ENST00000488072 PIPOXQ9P0Z9 390 aa13.66□□□□□ -0.22
SHROOM1-205ENST00000488072 M0QYG6 137 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 OR2F2O95006 317 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 NDUFA7O95182 113 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 FAM106CPP0CH98 169 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 OR5H8P0DN80 308 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 CBX5P45973 191 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 FXYD4P59646 89 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 EBI3Q14213 229 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 CDK10Q15131 360 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 THNSL2Q86YJ6 484 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 OR5AP2Q8NGF4 316 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 SOSTQ9BQB4 213 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 CCL28Q9NRJ3 127 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 PLSCR3Q9NRY6 295 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 EHFQ9NZC4 300 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 ZNF221Q9UK13 617 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 ADAM30Q9UKF2 790 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 OR2W1Q9Y3N9 320 aa13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 RBM7Q9Y580 266 aaKnown RBP13.65□□□□□ -0.22
SHROOM1-205ENST00000488072 A6NHS1 94 aa13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 LINC01548A6NM66 108 aa13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 H0YJW9 148 aa13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 HAX1O00165 279 aa13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 PEX14O75381 377 aa13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 TSPAN9O75954 239 aa13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 CTXN2P0C2S0 81 aa13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 CD1BP29016 333 aa13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 HRH1P35367 487 aa13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 RPL30P62888 115 aaKnown RBP13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 IL18Q14116 193 aa13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 ABCA11PQ4W5N1 156 aa13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 S1PR3Q99500 378 aa13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 TINAGL1Q9GZM7 467 aaPredicted RBP13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 SCPEP1Q9HB40 452 aa13.64□□□□□ -0.23
SHROOM1-205ENST00000488072 TENM1Q9UKZ4 2725 aa13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 STAB1Q9NY15 2570 aa13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 LINC00473A8K010 186 aa13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 DIRAS3O95661 229 aa13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 LUMP51884 338 aaPredicted RBP13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 C9orf152Q5JTZ5 239 aa13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 ZNF660Q6AZW8 331 aaPredicted RBP13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 C12orf54Q6X4T0 127 aa13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 OVCH2Q7RTZ1 564 aa13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 OR4D10Q8NGI6 311 aa13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 OR5H2Q8NGV7 314 aa13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 SECTM1Q8WVN6 248 aa13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 NECAP2Q9NVZ3 263 aa13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 PITPNC1Q9UKF7 332 aa13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 V9GYH0 126 aa13.63□□□□□ -0.23
SHROOM1-205ENST00000488072 CLPSL1A2RUU4 121 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 NCBP2LA6PVI3 153 aaKnown RBP13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 TNFSF12O43508 249 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 MOSP00540 346 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 PPYP01298 95 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 COMPP49747 757 aaPredicted RBP13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 ARHGDIBP52566 201 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 FAAP20Q6NZ36 180 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 C5orf56Q8N8D9 126 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 OR2T10Q8NGZ9 312 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 OR4F5Q8NH21 305 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 ZNF2Q9BSG1 426 aaPredicted RBP13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 NPFFR1Q9GZQ6 430 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 FXYD6Q9H0Q3 95 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 MMP27Q9H306 513 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 C16orf95Q9H693 158 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 SERTAD4Q9NUC0 356 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 MTFP1Q9UDX5 166 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 RNF114Q9Y508 228 aa13.62□□□□□ -0.23
SHROOM1-205ENST00000488072 FABP12A6NFH5 140 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 SULT1C2O00338 296 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 TXNL1O43396 289 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 CD3DP04234 171 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 IGKV1-16P04430 117 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 RCVRNP35243 200 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 ACTBP60709 375 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 FOXL1Q12952 345 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 DYRK1AQ13627 763 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 OR2B11Q5JQS5 317 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 PYHIN1Q6K0P9 492 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 C10orf99Q6UWK7 81 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 LIAT1Q6ZQX7 453 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 TMEM17Q86X19 198 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 C11orf44Q8N8P7 122 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 Q8N9W7 124 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 BVESQ8NE79 360 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 OR5AN1Q8NGI8 311 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 OR4C13Q8NGP0 309 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 OR6Q1Q8NGQ2 317 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 LINC00527Q9UJ94 153 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 MOB4Q9Y3A3 225 aa13.61□□□□□ -0.23
SHROOM1-205ENST00000488072 H7C2Y5 167 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 DUTP33316 252 aaKnown RBP13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 PROK1P58294 105 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 BRWD1-AS2P59051 145 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 EIF4EBP1Q13541 118 aaPredicted RBP13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 ZNF79Q15937 498 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 FAM71F2Q6NXP2 309 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 C11orf88Q6PI97 169 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms