RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 TRAV24A0A0B4J272 114 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 MT-ND4LP03901 98 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 MGST1P10620 155 aaKnown RBP11.22□□□□□ -0.61
HMGN1-216ENST00000486741 ACOT6Q3I5F7 207 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-216ENST00000486741 CYB5R2Q6BCY4 276 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 DHRS11Q6UWP2 260 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 C12orf77C9JDV5 145 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 SNRPCP09234 159 aaKnown RBP11.22□□□□□ -0.61
HMGN1-216ENST00000486741 OR5D13Q8NGL4 314 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 OR10G4Q8NGN3 311 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 OR10G9Q8NGN4 311 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 OR10G7Q8NGN6 311 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 POM121Q96HA1 1249 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 TMEM68Q96MH6 324 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 AURKAIP1Q9NWT8 199 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-216ENST00000486741 hADV38S2A0JD32 116 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 ODAMA1E959 279 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 C7orf77A4D0Y5 90 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 BTBD17A6NE02 478 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 ZNF503-AS2A6NEH8 195 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 NRN1LQ496H8 165 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 MDS2Q8NDY4 140 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 CABLES2Q9BTV7 478 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 PATZ1Q9HBE1 687 aaKnown RBP11.22□□□□□ -0.61
HMGN1-216ENST00000486741 ZNF355PQ9NSJ1 428 aa11.22□□□□□ -0.61
HMGN1-216ENST00000486741 hCG_1809904A0A1W2PP81 198 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 A0A1W2PPE2 198 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 A0A1W2PPH5 198 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 A0A1W2PR64 198 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 A0A1W2PRV1 198 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 LGALS4P56470 323 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 MRPL30Q8TCC3 161 aaKnown RBP11.21□□□□□ -0.61
HMGN1-216ENST00000486741 SLC35D1Q9NTN3 355 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 A0A1W2PPQ1 181 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 CBY3A6NI87 242 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 S1PR2O95136 353 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 FGF2P09038 288 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 B2MP61769 119 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 HFEQ30201 348 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 LHFPL1Q86WI0 220 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 BSCL2Q96G97 398 aaPredicted RBP11.21□□□□□ -0.61
HMGN1-216ENST00000486741 OR51I2Q9H344 312 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 PARP11Q9NR21 331 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 KCNMB2Q9Y691 235 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 NCOR2Q9Y618 2525 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 FAM208BQ5VWN6 2430 aa11.21□□□□□ -0.61
HMGN1-216ENST00000486741 IGHV2OR16-5A0A0B4J2B6 119 aa11.21□□□□□ -0.62
HMGN1-216ENST00000486741 IGSF23A1L1A6 192 aa11.21□□□□□ -0.62
HMGN1-216ENST00000486741 RPL31P62899 125 aaKnown RBP11.21□□□□□ -0.62
HMGN1-216ENST00000486741 HIST1H3AP68431 136 aa11.21□□□□□ -0.62
HMGN1-216ENST00000486741 IL36GQ9NZH8 169 aa11.21□□□□□ -0.62
HMGN1-216ENST00000486741 MGST3O14880 152 aa11.21□□□□□ -0.62
HMGN1-216ENST00000486741 ZNF737O75373 536 aa11.21□□□□□ -0.62
HMGN1-216ENST00000486741 BTNL8Q6UX41 500 aa11.21□□□□□ -0.62
HMGN1-216ENST00000486741 GALNT14Q96FL9 552 aa11.21□□□□□ -0.62
HMGN1-216ENST00000486741 SLC35E1Q96K37 410 aa11.21□□□□□ -0.62
HMGN1-216ENST00000486741 RARRES2Q99969 163 aa11.21□□□□□ -0.62
HMGN1-216ENST00000486741 CRIM1Q9NZV1 1036 aa11.21□□□□□ -0.62
HMGN1-216ENST00000486741 TLN1Q9Y490 2541 aaKnown RBP11.2□□□□□ -0.62
HMGN1-216ENST00000486741 SZT2Q5T011 3432 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 PPIHO43447 177 aaKnown RBP11.2□□□□□ -0.62
HMGN1-216ENST00000486741 IL3RAP26951 378 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 HTD2P86397 168 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 ARSJQ5FYB0 599 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-216ENST00000486741 GLRX5Q86SX6 157 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 LRP11Q86VZ4 500 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 DOK5Q9P104 306 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 RALYQ9UKM9 306 aaKnown RBP11.2□□□□□ -0.62
HMGN1-216ENST00000486741 IGHV3-72A0A0B4J1Y9 119 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 A8MXE2 369 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 HRASP01112 189 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 GAPDHP04406 335 aaKnown RBP11.2□□□□□ -0.62
HMGN1-216ENST00000486741 FBP1P09467 338 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 OR4A8P0C604 315 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 CEACAM1P13688 526 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 UCP3P55916 312 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 ERHP84090 104 aaKnown RBP11.2□□□□□ -0.62
HMGN1-216ENST00000486741 SRSF3P84103 164 aaKnown RBP11.2□□□□□ -0.62
HMGN1-216ENST00000486741 OR13A1Q8NGR1 328 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 UHRF2Q96PU4 802 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 TRANK1O15050 2925 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 TRAV38-1A0A0B4J264 116 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 MDFIC2A0A1B0GVS7 189 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 CCL21O00585 134 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 TCAPO15273 167 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 CD3EP07766 207 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 NCR3LG1Q68D85 454 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 PRR7Q8TB68 274 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 SEC11CQ9BY50 192 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 ZNF665Q9H7R5 613 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 ONECUT1Q9UBC0 465 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 EML6Q6ZMW3 1958 aa11.2□□□□□ -0.62
HMGN1-216ENST00000486741 KIR2DL2P43627 348 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-216ENST00000486741 COMMD1Q8N668 190 aa11.19□□□□□ -0.62
HMGN1-216ENST00000486741 TIMD4Q96H15 378 aa11.19□□□□□ -0.62
HMGN1-216ENST00000486741 OR4C12Q96R67 309 aa11.19□□□□□ -0.62
HMGN1-216ENST00000486741 TMEM204Q9BSN7 226 aa11.19□□□□□ -0.62
HMGN1-216ENST00000486741 SCNM1Q9BWG6 230 aa11.19□□□□□ -0.62
HMGN1-216ENST00000486741 CACFD1Q9UGQ2 172 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms