RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CD3EP07766 207 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 DANCRP0C864 163 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 M6PRP20645 277 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 GPR12P47775 334 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 SULT1A1P50225 295 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 C17orf58Q2M2W7 97 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 ADAM5Q6NVV9 412 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 Q6ZRM9 215 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 ZNF295-AS1Q8N0V1 137 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 SPAG16Q8N0X2 631 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 TPRX1Q8N7U7 411 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 BOLLQ8N9W6 283 aaKnown RBP9.92□□□□□ -0.82
PKP4-213ENST00000486254 UBALD1Q8TB05 177 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 GNPNAT1Q96EK6 184 aaPredicted RBP9.92□□□□□ -0.82
PKP4-213ENST00000486254 TSNAXQ99598 290 aaKnown RBP9.92□□□□□ -0.82
PKP4-213ENST00000486254 PARD6GQ9BYG4 376 aaPredicted RBP9.92□□□□□ -0.82
PKP4-213ENST00000486254 IFI27L2Q9H2X8 130 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 WFDC1Q9HC57 220 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 KAAG1Q9UBP8 84 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 PSG11Q9UQ72 335 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 ATMQ13315 3056 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 hADV38S2A0JD32 116 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 TMEM8BA6NDV4 472 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 FAM24AA6NFZ4 105 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 E7EQL1 145 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 TNFRSF13BO14836 293 aaPredicted RBP9.91□□□□□ -0.82
PKP4-213ENST00000486254 ZG16O60844 167 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 CYB5R3P00387 301 aaPredicted RBP9.91□□□□□ -0.82
PKP4-213ENST00000486254 TFF1P04155 84 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 DUTP33316 252 aaKnown RBP9.91□□□□□ -0.82
PKP4-213ENST00000486254 EDDM3BP56851 147 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 RPL30P62888 115 aaKnown RBP9.91□□□□□ -0.82
PKP4-213ENST00000486254 NHLH2Q02577 135 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 PJVKQ0ZLH3 352 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 MST1LQ2TV78 715 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 PXDC1Q5TGL8 231 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 ARFGEF3Q5TH69 2177 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 TCTEX1D2Q8WW35 142 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 PLPPR2Q96GM1 343 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 ADTRPQ96IZ2 230 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 ATP5SQ99766 215 aa9.91□□□□□ -0.82
PKP4-213ENST00000486254 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.91□□□□□ -0.82
PKP4-213ENST00000486254 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.9□□□□□ -0.82
PKP4-213ENST00000486254 CCL21O00585 134 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 HPRT1P00492 218 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 ZNF16P17020 682 aaPredicted RBP9.9□□□□□ -0.82
PKP4-213ENST00000486254 EPHA1P21709 976 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 BRWD1-AS2P59051 145 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 CCL8P80075 99 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 TNFRSF9Q07011 255 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 PDLIM3Q53GG5 364 aaPredicted RBP9.9□□□□□ -0.82
PKP4-213ENST00000486254 BTNL8Q6UX41 500 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 TCF23Q7RTU1 214 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 ODF3L1Q8IXM7 274 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 C8orf31Q8N9H6 132 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 ZNF439Q8NDP4 499 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 RFESDQ8TAC1 157 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 LINC00052Q96N35 136 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 CIB3Q96Q77 187 aaPredicted RBP9.9□□□□□ -0.82
PKP4-213ENST00000486254 TMEM204Q9BSN7 226 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 DCTN5Q9BTE1 182 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 ABHD14AQ9BUJ0 271 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 SMIM3Q9BZL3 60 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 TMEM106BQ9NUM4 274 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 PRELID3BQ9Y3B1 194 aa9.9□□□□□ -0.82
PKP4-213ENST00000486254 RAI1Q7Z5J4 1906 aaPredicted RBP9.9□□□□□ -0.82
PKP4-213ENST00000486254 PPIAL4EA0A075B759 164 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 C17orf98A8MV24 154 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 PPIAL4DF5H284 164 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 ST8SIA5O15466 376 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 RAMP3O60896 148 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 OR8U8P0C7N1 319 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 PPIAL4FP0DN26 164 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 HBG1P69891 147 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 HBG2P69892 147 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 UNQ6494/PRO21346Q6UXR6 183 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 DPPA3Q6W0C5 159 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 LFNGQ8NES3 379 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 OR5C1Q8NGR4 320 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 ZCCHC14Q8WYQ9 949 aaKnown RBP9.89□□□□□ -0.83
PKP4-213ENST00000486254 DDB2Q92466 427 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 BSCL2Q96G97 398 aaPredicted RBP9.89□□□□□ -0.83
PKP4-213ENST00000486254 MAGT1Q9H0U3 335 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 GAL3ST2Q9H3Q3 398 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 DYNLRB1Q9NP97 96 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 IDI2-AS1Q9NZ38 188 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 RPUSD1Q9UJJ7 312 aaKnown RBP9.89□□□□□ -0.83
PKP4-213ENST00000486254 RNF150Q9ULK6 438 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 PPIAL4AQ9Y536 164 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 ROS1P08922 2347 aa9.89□□□□□ -0.83
PKP4-213ENST00000486254 IGHV3-43A0A0B4J1X8 118 aa9.88□□□□□ -0.83
PKP4-213ENST00000486254 MARCH11A6NNE9 402 aa9.88□□□□□ -0.83
PKP4-213ENST00000486254 LINC00473A8K010 186 aa9.88□□□□□ -0.83
PKP4-213ENST00000486254 PROP1O75360 226 aa9.88□□□□□ -0.83
PKP4-213ENST00000486254 FBXO24O75426 580 aa9.88□□□□□ -0.83
PKP4-213ENST00000486254 S1PR2O95136 353 aa9.88□□□□□ -0.83
PKP4-213ENST00000486254 IGHV3-43DP0DP04 118 aa9.88□□□□□ -0.83
PKP4-213ENST00000486254 UBE2KP61086 200 aa9.88□□□□□ -0.83
PKP4-213ENST00000486254 ADORA2A-AS1P86434 159 aa9.88□□□□□ -0.83
PKP4-213ENST00000486254 FAM201AQ5SY85 155 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms