RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 SETXQ7Z333 2677 aaKnown RBP3.16□□□□□ -1.9
UPF3A-207ENST00000481131 ASH1LQ9NR48 2969 aaKnown RBP3.15□□□□□ -1.9
UPF3A-207ENST00000481131 FBN2P35556 2912 aa3.15□□□□□ -1.9
UPF3A-207ENST00000481131 CELSR2Q9HCU4 2923 aa3.15□□□□□ -1.9
UPF3A-207ENST00000481131 TRAPPC13A5PLN9 417 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 EEF1E1-BLOC1S5C9J1V9 151 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 FTCDNL1E5RQL4 147 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 H7C417 338 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 FFAR1O14842 300 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 EEF1E1O43324 174 aaKnown RBP3.15□□□□□ -1.91
UPF3A-207ENST00000481131 CHP2O43745 196 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 HLA-HP01893 362 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 HBE1P02100 147 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 CD3GP09693 182 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 GRPRP30550 384 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 AGTR1P30556 359 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 MNAT1P51948 309 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 CARD18P57730 90 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 COPZ1P61923 177 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 PPP1CBP62140 327 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 SELENOWP63302 87 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 TFF3Q07654 80 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 GUSBP1Q15486 140 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 TSC22D1Q15714 1073 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 BCL2A1Q16548 175 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 ZNF691Q5VV52 312 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 C1orf140Q5VVS0 124 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 NTM-AS1Q6ZSK4 140 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 TMPPEQ6ZT21 453 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 MBOAT2Q6ZWT7 520 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 SAXO1Q8IYX7 474 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 CNEP1R1Q8N9A8 125 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 C11orf72Q8NBR9 251 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 LRRC29Q8WV35 223 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 APH1BQ8WW43 257 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 DDIT4LQ96D03 193 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 STARD4Q96DR4 205 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 THTPAQ9BU02 230 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 HEATR1Q9H583 2144 aaKnown RBP3.15□□□□□ -1.91
UPF3A-207ENST00000481131 ARMC7Q9H6L4 198 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 RNF122Q9H9V4 155 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 CLN6Q9NWW5 311 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 MYEF2Q9P2K5 600 aaKnown RBP3.15□□□□□ -1.91
UPF3A-207ENST00000481131 MTFP1Q9UDX5 166 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 CENPEQ02224 2701 aa3.15□□□□□ -1.91
UPF3A-207ENST00000481131 LRBAP50851 2863 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 ANKHD1Q8IWZ3 2542 aaKnown RBP3.14□□□□□ -1.91
UPF3A-207ENST00000481131 TRAV36DV7A0A075B6V5 113 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 A0A087WUJ7 227 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 H7C1H1 209 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 M0R3G1 203 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 GYG2O15488 501 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 RCBTB2O95199 551 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 AHSA1O95433 338 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 IFNW1P05000 195 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 UBCP0CG48 685 aaKnown RBP3.14□□□□□ -1.91
UPF3A-207ENST00000481131 IGHV1-8P0DP01 117 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 GPR4P46093 362 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 CTBP2P56545 445 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 TAS2R41P59536 307 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 ESRRGP62508 458 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 SYCNQ0VAF6 134 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 SLAQ13239 276 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 STUMQ69YW2 141 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 LCN8Q6JVE9 175 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 ULK3Q6PHR2 472 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 TBPL2Q6SJ96 375 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 CASP12Q6UXS9 341 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 DHFR2Q86XF0 187 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 ARRDC1Q8N5I2 433 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 ZIC4Q8N9L1 334 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 CHST4Q8NCG5 386 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 LILRB4Q8NHJ6 448 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 CA5BP1Q8WTZ4 195 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 GLYATL2Q8WU03 294 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 RASSF5Q8WWW0 418 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 LZICQ8WZA0 190 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 SLC35B4Q969S0 331 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 CPNE4Q96A23 557 aaPredicted RBP3.14□□□□□ -1.91
UPF3A-207ENST00000481131 FOXC2Q99958 501 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 ZNF426Q9BUY5 554 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 EDA2RQ9HAV5 297 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 TMEM27Q9HBJ8 222 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 MRPL22Q9NWU5 206 aaKnown RBP3.14□□□□□ -1.91
UPF3A-207ENST00000481131 MCTS1Q9ULC4 181 aaKnown RBP3.14□□□□□ -1.91
UPF3A-207ENST00000481131 AP3M1Q9Y2T2 418 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 HDGFL3Q9Y3E1 203 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 ENPP4Q9Y6X5 453 aa3.14□□□□□ -1.91
UPF3A-207ENST00000481131 CHD3Q12873 2000 aaKnown RBP3.14□□□□□ -1.91
UPF3A-207ENST00000481131 CADP27708 2225 aa3.13□□□□□ -1.91
UPF3A-207ENST00000481131 AKAP6Q13023 2319 aa3.13□□□□□ -1.91
UPF3A-207ENST00000481131 TRAV27A0A087WT01 109 aa3.13□□□□□ -1.91
UPF3A-207ENST00000481131 A0A087WUU8 490 aa3.13□□□□□ -1.91
UPF3A-207ENST00000481131 ANKRD65E5RJM6 399 aa3.13□□□□□ -1.91
UPF3A-207ENST00000481131 CDC42EP2O14613 210 aa3.13□□□□□ -1.91
UPF3A-207ENST00000481131 SIVA1O15304 175 aa3.13□□□□□ -1.91
UPF3A-207ENST00000481131 LYZL6O75951 148 aa3.13□□□□□ -1.91
UPF3A-207ENST00000481131 OR5F1O95221 314 aa3.13□□□□□ -1.91
UPF3A-207ENST00000481131 IFNA14P01570 189 aa3.13□□□□□ -1.91
UPF3A-207ENST00000481131 IFI30P13284 250 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms