RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 OR8U9P0C7N5 309 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 NFYAP23511 347 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-215ENST00000478531 SRSF4Q08170 494 aaKnown RBP5.51□□□□□ -1.53
BRCA1-215ENST00000478531 LSAMPQ13449 338 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 SRSF7Q16629 238 aaKnown RBP eCLIP5.51□□□□□ -1.53
BRCA1-215ENST00000478531 LY6G6FQ5SQ64 297 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 FAM131AQ6UXB0 335 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 Q6ZS49 121 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 ZNF833PQ6ZTB9 187 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 C16orf82Q7Z2V1 217 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 LAX1Q8IWV1 398 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 DRAXINQ8NBI3 349 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-215ENST00000478531 OR8U1Q8NH10 309 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 WFDC12Q8WWY7 111 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 AGMATQ9BSE5 352 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 PRSS22Q9GZN4 317 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 C6orf62Q9GZU0 229 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-215ENST00000478531 RANBP3Q9H6Z4 567 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-215ENST00000478531 ZNF702PQ9H963 129 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 PLA2G2EQ9NZK7 142 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 CCDC59Q9P031 241 aaKnown RBP5.51□□□□□ -1.53
BRCA1-215ENST00000478531 PIPOXQ9P0Z9 390 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 CEPT1Q9Y6K0 416 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 TET2Q6N021 2002 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-215ENST00000478531 FBN3Q75N90 2809 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 A0A1B0GUS0 222 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 FAM90A9PA6NNJ1 464 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 MOSP00540 346 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 VSIG10L2P0DP72 767 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 CD1BP29016 333 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 VDAC2P45880 294 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-215ENST00000478531 Q6ZS46 218 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 HOGA1Q86XE5 327 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 THNSL2Q86YJ6 484 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 H1FOOQ8IZA3 346 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-215ENST00000478531 OR2T10Q8NGZ9 312 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 DYNC2LI1Q8TCX1 351 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 SNAPC3Q92966 411 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 EAF1Q96JC9 268 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-215ENST00000478531 NABP2Q9BQ15 211 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 DCUN1D5Q9BTE7 237 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 C16orf95Q9H693 158 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 EXTL2Q9UBQ6 330 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 MMP24Q9Y5R2 645 aa5.5□□□□□ -1.53
BRCA1-215ENST00000478531 H7C2Y5 167 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 M0R1X1 148 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 ITGB1BP1O14713 200 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 DIRAS3O95661 229 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 PRSS3P35030 304 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 CBX5P45973 191 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 PROK1P58294 105 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 LINC00205P59089 165 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 MMDQ15546 238 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 HIST2H2BDQ6DRA6 164 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 FAM71F2Q6NXP2 309 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 CNIH2Q6PI25 160 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 KLHDC1Q8N7A1 406 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 C5orf56Q8N8D9 126 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 C11orf44Q8N8P7 122 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 CMTM3Q96MX0 182 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 ZNF251Q9BRH9 671 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 NECAP2Q9NVZ3 263 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 RSL24D1Q9UHA3 163 aaKnown RBP5.49□□□□□ -1.53
BRCA1-215ENST00000478531 NOTCH1P46531 2555 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 M0QZK8 103 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 CTDSP2O14595 271 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 HLA-DQB1P01920 261 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 AMY1AP04745 511 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 AMY2AP04746 511 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 CTXN2P0C2S0 81 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 CT45A6P0DMU7 189 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 CT45A5P0DMU8 189 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 CT45A7P0DMV0 189 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 CNTFRP26992 372 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 F2RL1P55085 397 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 C11orf88Q6PI97 169 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 C5orf30Q96GV9 206 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 ZNF747Q9BV97 191 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 TOLLIPQ9H0E2 274 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 RBM38Q9H0Z9 239 aaKnown RBP5.49□□□□□ -1.53
BRCA1-215ENST00000478531 MIXL1Q9H2W2 232 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 GHITMQ9H3K2 345 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 SDHAF2Q9NX18 166 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 EHFQ9NZC4 300 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 ADAM30Q9UKF2 790 aa5.49□□□□□ -1.53
BRCA1-215ENST00000478531 IGKV1D-13A0A0B4J2D9 117 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 OR5H14A6NHG9 310 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 H0YJW9 148 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 APOA2P02652 100 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 PMP2P02689 132 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 OR5H8P0DN80 308 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 IGKV1-13P0DP09 117 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 AADACP22760 399 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 HLA-DMAP28067 261 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 FCGR2CP31995 323 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 RFX2P48378 723 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 LUMP51884 338 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-215ENST00000478531 FXYD4P59646 89 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 KRTAP10-3P60369 221 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 ACTBP60709 375 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms