RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 C15orf40Q8WUR7 153 aa12.71□□□□□ -0.37
COPS3-207ENST00000477299 GIMAP1Q8WWP7 306 aa12.71□□□□□ -0.37
COPS3-207ENST00000477299 ZNF2Q9BSG1 426 aaPredicted RBP12.71□□□□□ -0.37
COPS3-207ENST00000477299 THAP7Q9BT49 309 aaPredicted RBP12.71□□□□□ -0.37
COPS3-207ENST00000477299 SRRQ9GZT4 340 aa12.71□□□□□ -0.37
COPS3-207ENST00000477299 PIPOXQ9P0Z9 390 aa12.71□□□□□ -0.37
COPS3-207ENST00000477299 ZNF221Q9UK13 617 aa12.71□□□□□ -0.37
COPS3-207ENST00000477299 VPREB3Q9UKI3 123 aa12.71□□□□□ -0.37
COPS3-207ENST00000477299 TCF19Q9Y242 345 aa12.71□□□□□ -0.37
COPS3-207ENST00000477299 RBM7Q9Y580 266 aaKnown RBP12.71□□□□□ -0.37
COPS3-207ENST00000477299 POMT1Q9Y6A1 747 aa12.71□□□□□ -0.37
COPS3-207ENST00000477299 PLXNB1O43157 2135 aa12.71□□□□□ -0.38
COPS3-207ENST00000477299 SH2D7A6NKC9 451 aaPredicted RBP12.7□□□□□ -0.38
COPS3-207ENST00000477299 IGKV1D-33P01593 117 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 IGKV1-33P01594 117 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 ZNF735P0CB33 412 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 BRS3P32247 399 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 RELBQ01201 579 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 LSAMPQ13449 338 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 HABP2Q14520 560 aaPredicted RBP12.7□□□□□ -0.38
COPS3-207ENST00000477299 BAK1Q16611 211 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 Q6ZS46 218 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 OR8H3Q8N146 312 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 TMEM86BQ8N661 226 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 ZNF383Q8NA42 475 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 TMEM229BQ8NBD8 167 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 OR5R1Q8NH85 324 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 SECTM1Q8WVN6 248 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 JMJD8Q96S16 334 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 ATRQ13535 2644 aa12.7□□□□□ -0.38
COPS3-207ENST00000477299 OR5H14A6NHG9 310 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 TRIM77I1YAP6 450 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 M0R1X1 148 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 TAS2R46P59540 309 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 RPL30P62888 115 aaKnown RBP12.69□□□□□ -0.38
COPS3-207ENST00000477299 MRPS10P82664 201 aaKnown RBP12.69□□□□□ -0.38
COPS3-207ENST00000477299 SPANXN2Q5MJ10 180 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 CCDC144NLQ6NUI1 221 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 TMEM17Q86X19 198 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 Q8N402 240 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 TRIM63Q969Q1 353 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 EAF1Q96JC9 268 aaPredicted RBP12.69□□□□□ -0.38
COPS3-207ENST00000477299 S1PR3Q99500 378 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 MDFIQ99750 246 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 FXYD6Q9H0Q3 95 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 AKIP1Q9NQ31 210 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 PTTG2Q9NZH5 202 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 RABL2AQ9UBK7 228 aaPredicted RBP12.69□□□□□ -0.38
COPS3-207ENST00000477299 RABL2BQ9UNT1 228 aa12.69□□□□□ -0.38
COPS3-207ENST00000477299 LINC00473A8K010 186 aa12.68□□□□□ -0.38
COPS3-207ENST00000477299 CD74P04233 296 aa12.68□□□□□ -0.38
COPS3-207ENST00000477299 CNTFRP26992 372 aa12.68□□□□□ -0.38
COPS3-207ENST00000477299 ACTBP60709 375 aa12.68□□□□□ -0.38
COPS3-207ENST00000477299 ACTG1P63261 375 aa12.68□□□□□ -0.38
COPS3-207ENST00000477299 HES1Q14469 280 aa12.68□□□□□ -0.38
COPS3-207ENST00000477299 AADACL3Q5VUY0 350 aa12.68□□□□□ -0.38
COPS3-207ENST00000477299 STEAP1BQ6NZ63 245 aa12.68□□□□□ -0.38
COPS3-207ENST00000477299 OR4C16Q8NGL9 310 aa12.68□□□□□ -0.38
COPS3-207ENST00000477299 SLC5A7Q9GZV3 580 aa12.68□□□□□ -0.38
COPS3-207ENST00000477299 GAB2Q9UQC2 676 aa12.68□□□□□ -0.38
COPS3-207ENST00000477299 ANKRD20A5PA0PJZ0 165 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 BTBD17A6NE02 478 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 H0YJW9 148 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 TNFSF12O43508 249 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 RAB3DO95716 219 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 PTBP1P26599 531 aaKnown RBP eCLIP12.67□□□□□ -0.38
COPS3-207ENST00000477299 CD1BP29016 333 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 GNRHRP30968 328 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 F2RL1P55085 397 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 TAS2R19P59542 299 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 TSPAN5P62079 268 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 BLCAPP62952 87 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 EIF4EBP1Q13541 118 aaPredicted RBP12.67□□□□□ -0.38
COPS3-207ENST00000477299 EBI3Q14213 229 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 RNASE10Q5GAN6 216 aaKnown RBP12.67□□□□□ -0.38
COPS3-207ENST00000477299 VAX1Q5SQQ9 334 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 ZNF818PQ6ZRF7 136 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 THNSL2Q86YJ6 484 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 Q8N6K4 173 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 OR6F1Q8NGZ6 308 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 FAM216AQ8WUB2 273 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 MRGPRFQ96AM1 343 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 MOB3AQ96BX8 217 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 SLC25A33Q9BSK2 321 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 C1RLQ9NZP8 487 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 SIGLEC9Q9Y336 463 aa12.67□□□□□ -0.38
COPS3-207ENST00000477299 AMY1AP04745 511 aa12.66□□□□□ -0.38
COPS3-207ENST00000477299 AMY2AP04746 511 aa12.66□□□□□ -0.38
COPS3-207ENST00000477299 TMEM11P17152 192 aa12.66□□□□□ -0.38
COPS3-207ENST00000477299 DUTP33316 252 aaKnown RBP12.66□□□□□ -0.38
COPS3-207ENST00000477299 BRWD1-AS2P59051 145 aa12.66□□□□□ -0.38
COPS3-207ENST00000477299 SSBP1Q04837 148 aaKnown RBP12.66□□□□□ -0.38
COPS3-207ENST00000477299 KLF9Q13886 244 aaPredicted RBP12.66□□□□□ -0.38
COPS3-207ENST00000477299 FAM71F2Q6NXP2 309 aa12.66□□□□□ -0.38
COPS3-207ENST00000477299 Q6ZSV7 163 aa12.66□□□□□ -0.38
COPS3-207ENST00000477299 ZNF645Q8N7E2 425 aa12.66□□□□□ -0.38
COPS3-207ENST00000477299 OR5AN1Q8NGI8 311 aa12.66□□□□□ -0.38
COPS3-207ENST00000477299 RBM14Q96PK6 669 aaKnown RBP12.66□□□□□ -0.38
COPS3-207ENST00000477299 GHITMQ9H3K2 345 aa12.66□□□□□ -0.38
COPS3-207ENST00000477299 PLSCR3Q9NRY6 295 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms