RNA–Protein interactions for RNA: ENST00000477276.2

PTPN23-204, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 5

Gene PTPN23, Length 882 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-204	ENST00000477276	RBM38	Q9H0Z9	239 aa	Known RBP	13.98	□□□□□ -0.17
PTPN23-204	ENST00000477276	OR2D2	Q9H210	308 aa		13.98	□□□□□ -0.17
PTPN23-204	ENST00000477276	GHITM	Q9H3K2	345 aa		13.98	□□□□□ -0.17
PTPN23-204	ENST00000477276	SCOC	Q9UIL1	159 aa		13.98	□□□□□ -0.17
PTPN23-204	ENST00000477276	CEPT1	Q9Y6K0	416 aa		13.98	□□□□□ -0.17
PTPN23-204	ENST00000477276	OR8U9	P0C7N5	309 aa		13.97	□□□□□ -0.17
PTPN23-204	ENST00000477276	CNTFR	P26992	372 aa		13.97	□□□□□ -0.17
PTPN23-204	ENST00000477276	VDAC2	P45880	294 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN23-204	ENST00000477276	GPR12	P47775	334 aa		13.97	□□□□□ -0.17
PTPN23-204	ENST00000477276	ZNF383	Q8NA42	475 aa		13.97	□□□□□ -0.17
PTPN23-204	ENST00000477276	OR5AN1	Q8NGI8	311 aa		13.97	□□□□□ -0.17
PTPN23-204	ENST00000477276	OR8U1	Q8NH10	309 aa		13.97	□□□□□ -0.17
PTPN23-204	ENST00000477276	AP3S1	Q92572	193 aa		13.97	□□□□□ -0.17
PTPN23-204	ENST00000477276	S1PR3	Q99500	378 aa		13.97	□□□□□ -0.17
PTPN23-204	ENST00000477276	GINS4	Q9BRT9	223 aa		13.97	□□□□□ -0.17
PTPN23-204	ENST00000477276	MIXL1	Q9H2W2	232 aa		13.97	□□□□□ -0.17
PTPN23-204	ENST00000477276	SDHAF2	Q9NX18	166 aa		13.97	□□□□□ -0.17
PTPN23-204	ENST00000477276	IGKV1D-13	A0A0B4J2D9	117 aa		13.96	□□□□□ -0.17
PTPN23-204	ENST00000477276	TUSC2	O75896	110 aa		13.96	□□□□□ -0.17
PTPN23-204	ENST00000477276	FCER2	P06734	321 aa		13.96	□□□□□ -0.17
PTPN23-204	ENST00000477276	IGKV1-13	P0DP09	117 aa		13.96	□□□□□ -0.17
PTPN23-204	ENST00000477276	VSIG10L2	P0DP72	767 aa		13.96	□□□□□ -0.17
PTPN23-204	ENST00000477276	NFYA	P23511	347 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN23-204	ENST00000477276	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN23-204	ENST00000477276	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN23-204	ENST00000477276	CCDC59	Q9P031	241 aa	Known RBP	13.96	□□□□□ -0.17
PTPN23-204	ENST00000477276	GAB2	Q9UQC2	676 aa		13.96	□□□□□ -0.17
PTPN23-204	ENST00000477276	TET2	Q6N021	2002 aa	Predicted RBP	13.95	□□□□□ -0.18
PTPN23-204	ENST00000477276	OR5H14	A6NHG9	310 aa		13.95	□□□□□ -0.18
PTPN23-204	ENST00000477276	IGLV2-14	P01704	120 aa		13.95	□□□□□ -0.18
PTPN23-204	ENST00000477276	ACTB	P60709	375 aa		13.95	□□□□□ -0.18
PTPN23-204	ENST00000477276	ZNF221	Q9UK13	617 aa		13.95	□□□□□ -0.18
PTPN23-204	ENST00000477276	FBN3	Q75N90	2809 aa		13.95	□□□□□ -0.18
PTPN23-204	ENST00000477276	LINC01548	A6NM66	108 aa		13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276		M0R1X1	148 aa		13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	IGHG2	P01859	326 aa		13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	CTXN2	P0C2S0	81 aa		13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	NAT1	P18440	290 aa		13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	CBX5	P45973	191 aa		13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	MZT2A	Q6P582	158 aa		13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	C10orf99	Q6UWK7	81 aa		13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	LAX1	Q8IWV1	398 aa		13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	OR8H1	Q8NGG4	311 aa		13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	GPX8	Q8TED1	209 aa		13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	HSPB9	Q9BQS6	159 aa		13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	SLIRP	Q9GZT3	109 aa	Known RBP	13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	LIN7C	Q9NUP9	197 aa	Known RBP	13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	OR2W1	Q9Y3N9	320 aa		13.94	□□□□□ -0.18
PTPN23-204	ENST00000477276	NCBP2L	A6PVI3	153 aa	Known RBP	13.93	□□□□□ -0.18
PTPN23-204	ENST00000477276	CTDSP2	O14595	271 aa		13.93	□□□□□ -0.18
PTPN23-204	ENST00000477276	NDUFA3	O95167	84 aa		13.93	□□□□□ -0.18
PTPN23-204	ENST00000477276	IGKV1-16	P04430	117 aa		13.93	□□□□□ -0.18
PTPN23-204	ENST00000477276	MMD	Q15546	238 aa		13.93	□□□□□ -0.18
PTPN23-204	ENST00000477276	C9orf152	Q5JTZ5	239 aa		13.93	□□□□□ -0.18
PTPN23-204	ENST00000477276	C11orf44	Q8N8P7	122 aa		13.93	□□□□□ -0.18
PTPN23-204	ENST00000477276	NPB	Q8NG41	125 aa		13.93	□□□□□ -0.18
PTPN23-204	ENST00000477276	ADAM30	Q9UKF2	790 aa		13.93	□□□□□ -0.18
PTPN23-204	ENST00000477276	WNK1	Q9H4A3	2382 aa		13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276		J3QRK9	145 aa		13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	CD28	P10747	220 aa		13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	PRSS3	P35030	304 aa		13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	ARPC4	P59998	168 aa		13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	PRR31	Q5SQ13	230 aa		13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	SNX29P2	Q8IUI4	249 aa		13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	OR5AP2	Q8NGF4	316 aa		13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	DDB2	Q92466	427 aa		13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	NOL4L	Q96MY1	436 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	IFT46	Q9NQC8	304 aa		13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	EXTL2	Q9UBQ6	330 aa		13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	ZNF107	Q9UII5	783 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	WASHC3	Q9Y3C0	194 aa		13.92	□□□□□ -0.18
PTPN23-204	ENST00000477276	PLXNB1	O43157	2135 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	LINC00473	A8K010	186 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	ADARB2-AS1	A8MUL3	147 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	FAM25A	B3EWG3	89 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	FAM25C	B3EWG5	89 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	FAM25G	B3EWG6	89 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	NBR2	O15453	112 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	AADAC	P22760	399 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	DUT	P33316	252 aa	Known RBP	13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	SOX6	P35712	828 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	CDK10	Q15131	360 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	TCTEX1D4	Q5JR98	221 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	ZNF645	Q8N7E2	425 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	SGMS2	Q8NHU3	365 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	NECAP2	Q9NVZ3	263 aa		13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	MRPS7	Q9Y2R9	242 aa	Known RBP	13.91	□□□□□ -0.18
PTPN23-204	ENST00000477276	NOL3	O60936	208 aa	Known RBP	13.9	□□□□□ -0.18
PTPN23-204	ENST00000477276	FBXO24	O75426	580 aa		13.9	□□□□□ -0.18
PTPN23-204	ENST00000477276	OR5H8	P0DN80	308 aa		13.9	□□□□□ -0.18
PTPN23-204	ENST00000477276	FCGR2C	P31995	323 aa		13.9	□□□□□ -0.18
PTPN23-204	ENST00000477276	MC5R	P33032	325 aa		13.9	□□□□□ -0.18
PTPN23-204	ENST00000477276	LUM	P51884	338 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN23-204	ENST00000477276	C5orf64	Q2M2E5	130 aa		13.9	□□□□□ -0.18
PTPN23-204	ENST00000477276	OVCH2	Q7RTZ1	564 aa		13.9	□□□□□ -0.18
PTPN23-204	ENST00000477276	SLC35E3	Q7Z769	313 aa		13.9	□□□□□ -0.18
PTPN23-204	ENST00000477276	PDPN	Q86YL7	162 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms