RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 EDN3P14138 238 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 CHRNB4P30926 498 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 ADMP35318 185 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 FGF12P61328 243 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 PRSS8Q16651 343 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 ACSM6Q6P461 480 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 TMEM14EPQ6UXP3 125 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 OR5AU1Q8NGC0 362 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 OR10G9Q8NGN4 311 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 OR10G7Q8NGN6 311 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 ORAOV1Q8WV07 137 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 LRFN3Q9BTN0 628 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 LIN7CQ9NUP9 197 aaKnown RBP12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 COL27A1Q8IZC6 1860 aaPredicted RBP12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 TRAV39A0A0B4J263 110 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 MDFIC2A0A1B0GVS7 189 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 TCF21O43680 179 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 CHRNA7P36544 502 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 FOXL2P58012 376 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 LINC00596Q86U02 117 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 THAP3Q8WTV1 239 aaPredicted RBP12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 WDR54Q9H977 334 aa12.94□□□□□ -0.34
CLSTN1-205ENST00000477264 NPIPB11E5RHQ5 1161 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 IFNL4K9M1U5 179 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 DEGS1O15121 323 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 TNFSF12O43508 249 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 MSMO1Q15800 293 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 MRPL14Q6P1L8 145 aaKnown RBP12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 OR10V1Q8NGI7 309 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 C22orf15Q8WYQ4 148 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 ZPBPQ9BS86 351 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 WNT5BQ9H1J7 359 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 ZDHHC11Q9H8X9 412 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 KCNIP2Q9NS61 270 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 C19orf25Q9UFG5 118 aaPredicted RBP12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 SLC45A2Q9UMX9 530 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 PAM16Q9Y3D7 125 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 IGHV3-20A0A0C4DH32 117 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 C20orf202A1L168 122 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 C11orf94C9JXX5 98 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 CYC1P08574 325 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 TRIP6Q15654 476 aaKnown RBP12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 ZNF324BQ6AW86 544 aaPredicted RBP12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 OR51H1Q8NH63 302 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 GPHA2Q96T91 129 aa12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 AKIRIN1Q9H9L7 192 aaPredicted RBP12.93□□□□□ -0.34
CLSTN1-205ENST00000477264 IGKV1-6A0A0C4DH72 117 aa12.92□□□□□ -0.34
CLSTN1-205ENST00000477264 NUPR1O60356 82 aa12.92□□□□□ -0.34
CLSTN1-205ENST00000477264 PAGE4O60829 102 aa12.92□□□□□ -0.34
CLSTN1-205ENST00000477264 KLF3P57682 345 aaPredicted RBP12.92□□□□□ -0.34
CLSTN1-205ENST00000477264 PDCD1Q15116 288 aa12.92□□□□□ -0.34
CLSTN1-205ENST00000477264 BATFQ16520 125 aa12.92□□□□□ -0.34
CLSTN1-205ENST00000477264 SPANXN5Q5MJ07 72 aa12.92□□□□□ -0.34
CLSTN1-205ENST00000477264 LEMD1Q68G75 181 aa12.92□□□□□ -0.34
CLSTN1-205ENST00000477264 PCSK4Q6UW60 755 aa12.92□□□□□ -0.34
CLSTN1-205ENST00000477264 Q6ZRM9 215 aa12.92□□□□□ -0.34
CLSTN1-205ENST00000477264 RNF2Q99496 336 aa12.92□□□□□ -0.34
CLSTN1-205ENST00000477264 HSPB9Q9BQS6 159 aa12.92□□□□□ -0.34
CLSTN1-205ENST00000477264 TRBV9A0A0B4J1U6 114 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 MT-CO3P00414 261 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 CRISP2P16562 243 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 Q0VG73 95 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 FFAR4Q5NUL3 377 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 DHRS13Q6UX07 377 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 OR10G3Q8NGC4 313 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 PIGCQ92535 297 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 SFRP2Q96HF1 295 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 ZNF586Q9NXT0 402 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 UQCR10Q9UDW1 63 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 C17orf112F2Z3M2 114 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 CBR3O75828 277 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 ZFAND5O76080 213 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 TMEM164Q5U3C3 297 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 CALHM1Q8IU99 346 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 SGMS2Q8NHU3 365 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 SPSB4Q96A44 273 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 PATZ1Q9HBE1 687 aaKnown RBP12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 OTOGLQ3ZCN5 2332 aa12.91□□□□□ -0.34
CLSTN1-205ENST00000477264 IGKV1-39P01597 117 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 IGKV1-5P01602 117 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 IGKV1D-39P04432 117 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 NBL1P41271 181 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 LHX2P50458 406 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 ZNF709Q8N972 641 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 RAB1CQ92928 201 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 CIB3Q96Q77 187 aaPredicted RBP12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 WDFY3Q8IZQ1 3526 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 A0A1B0GUS0 222 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 K7EP13 123 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 BCL3P20749 454 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 CDKN1BP46527 198 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 PCBD1P61457 104 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 RBX1P62877 108 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 RSPO4Q2I0M5 234 aaPredicted RBP12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 HES3Q5TGS1 186 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 FAM69BQ5VUD6 431 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 PIP4P1Q86T03 277 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 OR2D3Q8NGH3 330 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 VN1R17PQ8TDU5 208 aa12.9□□□□□ -0.34
CLSTN1-205ENST00000477264 TMEM38BQ9NVV0 291 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms