RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PRSS27Q9BQR3 290 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 SIRT7Q9NRC8 400 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 TRBV5-3A0A0A0MS03 114 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 MED12Q93074 2177 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 PSME4Q14997 1843 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 ARID2Q68CP9 1835 aa9.48□□□□□ -0.89
VAPB-204ENST00000475243 CTXND1A0A1B0GTU2 59 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 B4E171 279 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 PTP4A3O75365 173 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 DEDDO75618 318 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 HPRT1P00492 218 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 ZNF250P15622 560 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 TSPAN7P41732 249 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 ZNF79Q15937 498 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 C8orf82Q6P1X6 216 aaPredicted RBP9.47□□□□□ -0.89
VAPB-204ENST00000475243 MIEN1Q9BRT3 115 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 TRAF4Q9BUZ4 470 aaPredicted RBP9.47□□□□□ -0.89
VAPB-204ENST00000475243 KIR2DL2P43627 348 aaPredicted RBP9.47□□□□□ -0.89
VAPB-204ENST00000475243 FAM74A3Q4VXF1 159 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 ZNF645Q8N7E2 425 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 PRDM6Q9NQX0 595 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 A0A0U1RQV5 110 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 PITX3O75364 302 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 CDS2O95674 445 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 IGKV3-20P01619 116 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 MPV17P39210 176 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 DIRC2Q96SL1 478 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 ANGPTL4Q9BY76 406 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 IL19Q9UHD0 177 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 ZNF236Q9UL36 1845 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 A0A1W2PPC1 479 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 PRR33A8MZF0 331 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 ZNF324O75467 553 aaPredicted RBP9.47□□□□□ -0.89
VAPB-204ENST00000475243 TMEM78Q5T7P6 136 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 AMELYQ99218 206 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 CACNA1EQ15878 2313 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 GVINP1Q7Z2Y8 2422 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 AHRRA9YTQ3 701 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 NDUFB4O95168 129 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 ACAA1P09110 424 aaPredicted RBP9.47□□□□□ -0.89
VAPB-204ENST00000475243 SGMS2Q8NHU3 365 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 SGK494Q96LW2 274 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 WFDC6Q9BQY6 131 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 SLC25A33Q9BSK2 321 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 FAM181BA6NEQ2 426 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 CLPPQ16740 277 aaPredicted RBP9.47□□□□□ -0.89
VAPB-204ENST00000475243 STXBP6Q8NFX7 210 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 ELOVL1Q9BW60 279 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 RBKSQ9H477 322 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 SCN4AP35499 1836 aa9.47□□□□□ -0.89
VAPB-204ENST00000475243 IGKV3OR2-268A0A0C4DH90 116 aa9.46□□□□□ -0.89
VAPB-204ENST00000475243 B4DEV8 164 aa9.46□□□□□ -0.89
VAPB-204ENST00000475243 RSPO4Q2I0M5 234 aaPredicted RBP9.46□□□□□ -0.89
VAPB-204ENST00000475243 CYB561D1Q8N8Q1 229 aa9.46□□□□□ -0.89
VAPB-204ENST00000475243 COL11A2P13942 1736 aaPredicted RBP9.46□□□□□ -0.89
VAPB-204ENST00000475243 COL5A3P25940 1745 aaPredicted RBP9.46□□□□□ -0.89
VAPB-204ENST00000475243 IGHV3-35A0A0C4DH35 117 aa9.46□□□□□ -0.89
VAPB-204ENST00000475243 LINC00869P0C866 280 aa9.46□□□□□ -0.89
VAPB-204ENST00000475243 SLC25A17O43808 307 aa9.46□□□□□ -0.89
VAPB-204ENST00000475243 OR10J1P30954 320 aa9.46□□□□□ -0.89
VAPB-204ENST00000475243 MEOX2P50222 304 aa9.46□□□□□ -0.89
VAPB-204ENST00000475243 ZP4Q12836 540 aa9.46□□□□□ -0.89
VAPB-204ENST00000475243 TMEM189A5PLL7 270 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 EPOPA6NHQ4 379 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 PRR19A6NJB7 356 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 DXOO77932 396 aaKnown RBP9.46□□□□□ -0.9
VAPB-204ENST00000475243 OR2A4O95047 310 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 ZNF383Q8NA42 475 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 OR2A7Q96R45 310 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 TMEM229AB2RXF0 380 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 M0R143 59 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.46□□□□□ -0.9
VAPB-204ENST00000475243 DCAF12L2Q5VW00 463 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 UNQ5815/PRO19632Q6UWF5 114 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 SMAD7O15105 426 aaKnown RBP9.46□□□□□ -0.9
VAPB-204ENST00000475243 CA11O75493 328 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 VSIG10L2P0DP72 767 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 GZMMP51124 257 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 CXorf66Q5JRM2 361 aaPredicted RBP9.46□□□□□ -0.9
VAPB-204ENST00000475243 WDFY1Q8IWB7 410 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 UCNP55089 124 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 PGLYRP4Q96LB8 373 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 ZDHHC8Q9ULC8 765 aa9.46□□□□□ -0.9
VAPB-204ENST00000475243 BPIFA4PQ86YQ2 179 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 PILRBQ9UKJ0 227 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 IFITM10A6NMD0 228 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 MGST3O14880 152 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 C1QL1O75973 258 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 MAS1LP35410 378 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 PRSS53Q2L4Q9 553 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 ELF5Q9UKW6 265 aaPredicted RBP9.45□□□□□ -0.9
VAPB-204ENST00000475243 CTSSP25774 331 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 H3BTX0 84 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 CKS2P33552 79 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 ATP5J2P56134 94 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 ZNF107Q9UII5 783 aaPredicted RBP9.45□□□□□ -0.9
VAPB-204ENST00000475243 WNK2Q9Y3S1 2297 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 LY75O60449 1722 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 NGFRP08138 427 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 UQCRFS1P47985 274 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms